Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01233 ATGCAGAGCGCGGCTTTCACTCTCTCTCCGTCGCTCTCTCTTCCTCTCCGCAACACTTCTCTAAACGCTTCTAGACCTTCTCTCCCTGTCAGACTTTTCGCCAAACACACAGAAGGCGTGAACTCCAATGGCGCCTCTTCCACTTCTTTCCTCCGCCGATCTTGGACTCTCTCTTCTTCCTCTTCCTTCAAGTTCCGCCCGCTCCCTCCCTCTCCTCCGCGCGCCGCGGAGAACGCAGTTCCCGACAGCGCGCCAGCCGAGAATTCGCTCTTCAAAACACTCGAGCTCGGCTCCTTGTTTGGCCTCTGGTACCTCTTCAACATCTACTTCAATATCTACAACAAACAGGTGTTGAAGGCGTTTCATTTTCCGGTAACTGTGACTGTTGTTCAATTTGCCGTTGGGACTGTGCTTGTGGCGTTTATGTGGGGTTTGAATCTCTACAAGAGGCCGAAGATCAGTGGTGCTATGCTTGGAGCGATTTTGCCACTAGCTGTGGTACATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGGAAGGTGGCCGTGTCTTTCACTCACACTATCAAGGCCATGGAGCCTTTCTTTTCAGTGGTCCTTTCTGCCATGTTCCTTGGAGAGTTTCCTACACCGTGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTGTTACTGAGGCCTCTTTCAATTGGGCCGGGTTTTGGAGTGCAATGGCATCAAATGTGACAAATCAATCCCGTAATGTTCTTAGCAAAAAGGTTATGGTTAAGAAAGAGGATTCTATGGACAATATCACTCTCTTCTCTATAATAACAGTAATGTCCTTCTTCTTGTTAGCACCAGTGGCTGTCTTCATGGAAGGTGTCAAATTTACCCCTGCTTACTTGCAATCTGCTGGATTAAATGTTAAACAACTTTACATCAGATCTCTTCTTGCCGCACTCTGTTTCCATGCGTATCAACAAGTGTCTTATATGATATTACAAAGGGTATCACCTGTTACCCACTCTGTGGGCAATTGTGTGAAGCGAGTTGTGGTCATTGTGAGCTCTGTCATTTTCTTCCAAACACCTGTCTCACCTGTGAATGCTTTTGGTACTGCTATAGCTCTTGCTGGCGTGTTCCTCTATTCAAGGGTGAAGCGAATTAAGTCAAAGCCAAAAACAGCTTAA 1191 0.4727 MQSAAFTLSPSLSLPLRNTSLNASRPSLPVRLFAKHTEGVNSNGASSTSFLRRSWTLSSSSSFKFRPLPPSPPRAAENAVPDSAPAENSLFKTLELGSLFGLWYLFNIYFNIYNKQVLKAFHFPVTVTVVQFAVGTVLVAFMWGLNLYKRPKISGAMLGAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEFPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKKEDSMDNITLFSIITVMSFFLLAPVAVFMEGVKFTPAYLQSAGLNVKQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKSKPKTA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01233 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 230 - -
Viun9g01233 396 Pfam Triose-phosphate Transporter family 95 384 IPR004853 -
Viun9g01233 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 94 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
Viun9g01233 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 304 387 - -
Viun9g01233 396 MobiDBLite consensus disorder prediction 61 81 - -
Viun9g01233 396 PANTHER SOLUTE CARRIER FAMILY 35 95 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01233 Viun-Chr9 11857032 11860598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01233 1 396 Antiporters AT5G33320 72.010 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01233 K15283 - gmx:100804563 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04410 3 51915592 51918521 Viun9g01233 9 11857032 11860598 ECH
Viun9g01233 9 11857032 11860598 Viun9g01233 9 11857032 11860598 ECH
Viun3g04410 3 51915592 51918521 Viun9g01233 9 11857032 11860598 PCT