Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01229 ATGGACCAAGGCTTTACTTATGCCAGAACGGAACTTGCTGCTCAAAGTAGTGACACGGTGTTAGCTAGTCAAGGCCATCAATTTTTAAGAAAGTGGTTAATTGATCATCCAAATTTTTTGTCGAATGAAGTTTACATTGGTGGTGATTCATACTCTGGCATTCCCCTTCCAGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAGGGGTTTCAACCAAGGATAAATCTCCAGGGATACATTTTGGGGAATCCATTCACAACGAGAAGGGAGCCAAACTATGCAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCATTACAAAAGAATTGTAAAGGAAACTACATCAATGTGGACCCCGAAAATATATTATGCTACAGAGATATGGAATCATTCAATAAGCTTGTATCAGGAATTTTTGAATACAATATTTTGGAGCCATGGTGTGAGAAGGATGAGAACCAACCTCCTTTAAGAAGATCCCTAATTGAGAAATTCCCTAGAAAGAACTTCTTGAAAACTGATCTCAAATTACTAGTCGTAACATGTCCAACTTATACGGATTTCCTATCTGATTATTGGACAAATGATGATAATGTTCGAACCGCACTTCATATTCACAAGGGAAGTATAGGAACATGGATTAAATGTCATCGTGATAGACGTTTCAAGTACGATATCTCGAGTAGTGTTGAATATCATGCAAATCTTAGTAGAAAAGGCTATCGTTCACTAATATATAGTGGCGATCATGACATGGTATTTCCTTTCTTGGGAACTCAAGAATGGATGAGATCATTAAACTACTCTATTGTTGATGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTGCAGGCCACATAGCTCCGACGCACAAACCCAAAGAATGTTTTGACATGTTCAGTAGATGGATATCTAAGAAGGCGTTATAG 1005 0.3801 MDQGFTYARTELAAQSSDTVLASQGHQFLRKWLIDHPNFLSNEVYIGGDSYSGIPLPAIVQEIAQGNEKGFQPRINLQGYILGNPFTTRREPNYAIPFAHGMALISDELYESLQKNCKGNYINVDPENILCYRDMESFNKLVSGIFEYNILEPWCEKDENQPPLRRSLIEKFPRKNFLKTDLKLLVVTCPTYTDFLSDYWTNDDNVRTALHIHKGSIGTWIKCHRDRRFKYDISSSVEYHANLSRKGYRSLIYSGDHDMVFPFLGTQEWMRSLNYSIVDDWRPWNSNGQVAGYTRTYSNQMTFATVKGAGHIAPTHKPKECFDMFSRWISKKAL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01229 334 FunFam Carboxypeptidase 237 331 - -
Viun9g01229 334 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 3 318 IPR001563 GO:0004185|GO:0006508
Viun9g01229 334 SUPERFAMILY alpha/beta-Hydrolases 3 332 IPR029058 -
Viun9g01229 334 PRINTS Carboxypeptidase C serine protease (S10) family signature 32 57 IPR001563 GO:0004185|GO:0006508
Viun9g01229 334 PRINTS Carboxypeptidase C serine protease (S10) family signature 301 314 IPR001563 GO:0004185|GO:0006508
Viun9g01229 334 Pfam Serine carboxypeptidase 3 330 IPR001563 GO:0004185|GO:0006508
Viun9g01229 334 FunFam Carboxypeptidase 188 333 - -
Viun9g01229 334 Gene3D alpha/beta hydrolase 1 334 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01229 Viun-Chr9 11697471 11718489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01229 196 334 Calmodulin-binding Proteins AT2G22960 60.432 6.27e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01229 K16296 - gmx:100792006 494.582