Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01227 ATGGGAAAGTTGAATTTACGTTTCATTTCTTCAGATCTGGTTCACTATGGACTTCTACTTTCCCTACTTCTTTTATCGCACTATTCCTTTCAACCTGCATCTTCTGCCTCCAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACTGGGTACGTGGGAGTGGGAGAATCAGAGGATGTGCAGACATTTTACTACTTCATTCAATCAGACAACAACCCCAAGGAAGATCCTCTCTTGCTTTGGCTTAGCGGTGGTCCTGGTTGTTCCTCCTTAAGTGGATTTTTTCTTGAAATAGGCTTTACTTATGCCAGAACGGAACTTGCTGCTCAAAGTAGTGACACGGTGTTAGCTAGTCAAGGCCATCAATTTTTAAGAAAGTGGTTAATTGATCATCCAAATTTTTTGTCGAATGAAGTTTACATTGGTGGTGATTCATACTCTGGCATTCCCCTTCCAGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAGGGGTTTCAACCAAGGATAAATCTCCAGGGATACATTTTGGGGAATCCATTCACAACGAGAAGGGAGCCAAACTATGCAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCATTACAAAAGAATTGTAAAGGAAACTACATCAATGTGGACCCCGAAAATATATTATGCTACAGAGATATGGAATCATTCAATAAGACTTATACGGATTTCCTATCTGATTATTGGACAAATGATGATAATGTTCGAACCGCACTTCATATTCACAAGGGAAGTATAGGAACATGGATTAAATGTCATCGTGATAGACGTTTCAAGTACGATATCTCGAGTAGTGTTGAATATCATGCAAATCTTAGTAGAAAAGGCTATCGTTCACTAATATATAGTGGCGATCATGACATGGTATTTCCTTTCTTGGGAACTCAAGAATGGATGAGATCATTAAACTACTCTATTGTTGATGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTGCAGGCCACATAGCTCCGACGCACAAACCCAAAGAATGTTTTGACATGTTCAGTAGATGGATATCTAAGAAGGCGTTATAG 1158 0.3955 MGKLNLRFISSDLVHYGLLLSLLLLSHYSFQPASSASRVKFLPGFEGPLPFVLETGYVGVGESEDVQTFYYFIQSDNNPKEDPLLLWLSGGPGCSSLSGFFLEIGFTYARTELAAQSSDTVLASQGHQFLRKWLIDHPNFLSNEVYIGGDSYSGIPLPAIVQEIAQGNEKGFQPRINLQGYILGNPFTTRREPNYAIPFAHGMALISDELYESLQKNCKGNYINVDPENILCYRDMESFNKTYTDFLSDYWTNDDNVRTALHIHKGSIGTWIKCHRDRRFKYDISSSVEYHANLSRKGYRSLIYSGDHDMVFPFLGTQEWMRSLNYSIVDDWRPWNSNGQVAGYTRTYSNQMTFATVKGAGHIAPTHKPKECFDMFSRWISKKAL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01227 385 Gene3D alpha/beta hydrolase 32 104 IPR029058 -
Viun9g01227 385 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 105 IPR001563 GO:0004185|GO:0006508
Viun9g01227 385 Pfam Serine carboxypeptidase 104 241 IPR001563 GO:0004185|GO:0006508
Viun9g01227 385 Pfam Serine carboxypeptidase 242 381 IPR001563 GO:0004185|GO:0006508
Viun9g01227 385 FunFam Carboxypeptidase 288 382 - -
Viun9g01227 385 Gene3D alpha/beta hydrolase 105 385 IPR029058 -
Viun9g01227 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 352 365 IPR001563 GO:0004185|GO:0006508
Viun9g01227 385 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 158 IPR001563 GO:0004185|GO:0006508
Viun9g01227 385 FunFam Carboxypeptidase 240 384 - -
Viun9g01227 385 SUPERFAMILY alpha/beta-Hydrolases 39 383 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01227 Viun-Chr9 11697471 11718652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01227 33 62 Calmodulin-binding Proteins AT2G22960 73.333 3.91e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01227 K16296 - gmx:100792006 532.332