Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01225 ATGCTTTGGCTTAACGGTGGTCCTGGTTGCTCAGCTCTGACTGGGCTTTTTCTTGAAATGGGCTTTACTTATGCCCGAACGGAACTTGCTGCTCAAAGTAGTGACACGTTGTTAGCTAGTCAAGGCCATCAATTTTTAAGAAAGTGGTTAATTGATCATCCAAATTTTTTGTCAAATGAAGTTTACATTGCTGGTGACTCATATGCTGGCATTCCACTTCCAGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAGGGGTTTCAACCAAGTATAAATCTCCAGGGATACATTTTGGGGAATCCAATAACAACGAGAACGGAGCCAAATTATGCAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCATTACAAAAGAATTGTAAAGGAAACTTCATCGATGTGGACTCCGAAAATATATTATGCTACAGAGATATGGAATCATTCAATAAGCTTGTATCAAGAATTTCTATCTACAATATTTTGGAGCCATGGTGTGAGAGTGATCATATCGTATCTCCTTTGAGAAGATCCTTAATTGAGAAATTTCCTAGAAAGCATTTCTTGAAAACTGATCTCAAATTGCCAGCCGTAACATGTCTGACTTATACGGAATTCTTATCTGCTTATTGGGCAAATGATGATAATGTTCAAACTGCACTTCATATTCACAAGGGAAGTATAGGAACATGGATTCGTTGTCATCGTGATTCACGTTTCAAGTACGATATCTTAAGTAGTGTTGAATATCACGCAAATCTTAGTAGAAATGGCTATCGTTCACTAATATACAGTGGCGATCATGACATGGCATCTCCTTTCTTGGGAACTCAAGAATGGATAAGATCTTTAAACTACTCTATTGTTGACGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCTAATCGCATGACATTTACAACTGTGAAGGCTGCAGGCCACACAGCTCCATTGTACAAACCCGAAGAATGTTTTGACATGCTCAGTAGATGGATATCTAAGAAGGCGTTATAG 1056 0.3854 MLWLNGGPGCSALTGLFLEMGFTYARTELAAQSSDTLLASQGHQFLRKWLIDHPNFLSNEVYIAGDSYAGIPLPAIVQEIAQGNEKGFQPSINLQGYILGNPITTRTEPNYAIPFAHGMALISDELYESLQKNCKGNFIDVDSENILCYRDMESFNKLVSRISIYNILEPWCESDHIVSPLRRSLIEKFPRKHFLKTDLKLPAVTCLTYTEFLSAYWANDDNVQTALHIHKGSIGTWIRCHRDSRFKYDILSSVEYHANLSRNGYRSLIYSGDHDMASPFLGTQEWIRSLNYSIVDDWRPWNSNGQVAGYTRTYSNRMTFTTVKAAGHTAPLYKPEECFDMLSRWISKKAL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01225 351 Gene3D alpha/beta hydrolase 1 20 IPR029058 -
Viun9g01225 351 SUPERFAMILY alpha/beta-Hydrolases 1 349 IPR029058 -
Viun9g01225 351 FunFam Carboxypeptidase 253 348 - -
Viun9g01225 351 FunFam Carboxypeptidase 205 350 - -
Viun9g01225 351 PRINTS Carboxypeptidase C serine protease (S10) family signature 49 74 IPR001563 GO:0004185|GO:0006508
Viun9g01225 351 PRINTS Carboxypeptidase C serine protease (S10) family signature 318 331 IPR001563 GO:0004185|GO:0006508
Viun9g01225 351 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 335 IPR001563 GO:0004185|GO:0006508
Viun9g01225 351 Pfam Serine carboxypeptidase 20 347 IPR001563 GO:0004185|GO:0006508
Viun9g01225 351 Gene3D - 205 350 - -
Viun9g01225 351 Gene3D alpha/beta hydrolase 21 174 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01225 Viun-Chr9 11640589 11652608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01225 213 351 Calmodulin-binding Proteins AT2G22960 61.871 8.43e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01225 K16296 - gmx:100792006 492.271