Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01224 ATGGGAAAGTTGAATTTACGTTTCATTTCTTCAGATCTGGTTCACTATGGACTTCTACTTTCCCTACTTCTTTTATCGCACTATTCCTTTCAACCTGCATCTTCTGCCTCCAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACTGGGTACGTGGGAGTGGGAGAATCAGAGGATGTGCAGACATTTTACTACTTCATTCAATCAGAAAACAACCCCAAGGAAGATCCTCTCATGCTTTGGCTTAACGGTGGTCCTGGTTGCTCAGCTCTGACTGGGCTTTTTCTTGAAATGGGCTTTACTTATGCCCGAACGGAACTTGCTGCTCAAAGTAGTGACACGTTGTTAGCTAGTCAAGGCCATCAATTTTTAAGAAAGTGGTTAATTGATCATCCAAATTTTTTGTCAAATGAAGTTTACATTGCTGGTGACTCATATGCTGGCATTCCACTTCCAGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAGGGGTTTCAACCAAGTATAAATCTCCAGGGATACATTTTGGGGAATCCAATAACAACGAGAACGGAGCCAAATTATGCAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCATTACAAAAGAATTGTAAAGGAAACTTCATCGATGTGGACTCCGAAAATATATTATGCTACAGAGATATGGAATCATTCAATAAGCTTGTATCAAGAATTTCTATCTACAATATTTTGGAGCCATGGTGTGAGAGTGATCATATCGTATCTCCTTTGAGAAGATCCTTAATTGAGAAATTTCCTAGAAAGCATTTCTTGAAAACTGATCTCAAATTGCCAGCCGTAACATGTCTGACTTATACGGAATTCTTATCTGCTTATTGGGCAAATGATGATAATGTTCAAACTGCACTTCATATTCACAAGGGAAGTATAGGAACATGGATTCGTTGTCATCGTGATTCACGTTTCAAGTACGATATCTTAAGTAGTGTTGAATATCACGCAAATCTTAGTAGAAATGGCTATCGTTCACTAATATACAGTGGCGATCATGACATGGCATCTCCTTTCTTGGGAACTCAAGAATGGATAAGATCTTTAAACTACTCTATTGTTGACGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCTAATCGCATGACATTTACAACTGTGAAGGCTGCAGGCCACACAGCTCCATTGTACAAACCCGAAGAATGTTTTGACATGCTCAGTAGATGGATATCTAAGAAGGCGTTATAG 1308 0.3937 MGKLNLRFISSDLVHYGLLLSLLLLSHYSFQPASSASRVKFLPGFEGPLPFVLETGYVGVGESEDVQTFYYFIQSENNPKEDPLMLWLNGGPGCSALTGLFLEMGFTYARTELAAQSSDTLLASQGHQFLRKWLIDHPNFLSNEVYIAGDSYAGIPLPAIVQEIAQGNEKGFQPSINLQGYILGNPITTRTEPNYAIPFAHGMALISDELYESLQKNCKGNFIDVDSENILCYRDMESFNKLVSRISIYNILEPWCESDHIVSPLRRSLIEKFPRKHFLKTDLKLPAVTCLTYTEFLSAYWANDDNVQTALHIHKGSIGTWIRCHRDSRFKYDILSSVEYHANLSRNGYRSLIYSGDHDMASPFLGTQEWIRSLNYSIVDDWRPWNSNGQVAGYTRTYSNRMTFTTVKAAGHTAPLYKPEECFDMLSRWISKKAL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01224 435 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 105 IPR001563 GO:0004185|GO:0006508
Viun9g01224 435 FunFam Carboxypeptidase 289 434 - -
Viun9g01224 435 Pfam Serine carboxypeptidase 104 431 IPR001563 GO:0004185|GO:0006508
Viun9g01224 435 Gene3D alpha/beta hydrolase 105 258 IPR029058 -
Viun9g01224 435 SUPERFAMILY alpha/beta-Hydrolases 39 433 IPR029058 -
Viun9g01224 435 Gene3D - 289 434 - -
Viun9g01224 435 FunFam Carboxypeptidase 337 432 - -
Viun9g01224 435 Gene3D alpha/beta hydrolase 32 104 IPR029058 -
Viun9g01224 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Viun9g01224 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 158 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01224 Viun-Chr9 11640589 11652758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01224 33 62 Calmodulin-binding Proteins AT2G22960 73.333 3.97e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01224 K16296 - gmx:100792006 597.43