Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01223 ATGGGAAAGTTGAATTTACGTTTCATTTCTTCAGATCTGGTTCACTATGGACTTCTACTTTCCCTACTTCTTTTATCGCACTATTCCTTTCAACCTGCATCTTCTGCCTCCAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCTCTTCCTTTTGTTCTTGAAACTGGGTACGTGGGAGTGGGAGAATCAGAGGATGTGCAGACATTTTACTACTTCATTCAATCAGAAAACAACCCCAAGGAAGATCCTCTCATGCTTTGGCTTAACGGTGGTCCTGGTTGCTCAGCTCTGACTGGGCTTTTTCTTGAAATGGGCTTTACTTATGCCCGAACGGAACTTGCTGCTCAAAGTAGTGACACGTTGTTAGCTAGTCAAGGCCATCAATTTTTAAGAAAGTGGTTAATTGATCATCCAAATTTTTTGTCAAATGAAGTTTACATTGCTGGTGACTCATATGCTGGCATTCCACTTCCAGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAGGGGTTTCAACCAAGTATAAATCTCCAGGGATACATTTTGGGGAATCCAATAACAACGAGAACGGAGCCAAATTATGCAATCCCCTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCATTACAAAAGAATTGTAAAGGAAACTTCATCGATGTGGACTCCGAAAATATATTATGCTACAGAGATATGGAATCATTCAATAAGCTTGTATCAAGAATTTCTATCTACAATATTTTGGAGCCATGGTGTGAGAGTGATCATATCGTATCTCCTTTGAGAAGATCCTTAATTGAGAAATTTCCTAGAAAGCATTTCTTGAAAACTGATCTCAAATTGCCAGCCGTAACATGTCTGACTTATACGGAATTCTTATCTGCTTATTGGGCAAATGATGATAATGTTCAAACTGCACTTCATATTCACAAGGGAAGTATAGGAACATGGATTCGTTGTCATCGTGATTCACGTTTCAAGTACGATATCTTAAGTAGTGTTGAATATCACGCAAATCTTAGTAGAAATGGCTATCGTTCACTAATATACAGATACACAAGGACTTACTCTAATCGCATGACATTTACAACTGTGAAGGCTGCAGGCCACACAGCTCCATTGTACAAACCCGAAGAATGTTTTGACATGCTCAGTAGATGGATATCTAAGAAGGCGTTATAG 1194 0.3903 MGKLNLRFISSDLVHYGLLLSLLLLSHYSFQPASSASRVKFLPGFEGPLPFVLETGYVGVGESEDVQTFYYFIQSENNPKEDPLMLWLNGGPGCSALTGLFLEMGFTYARTELAAQSSDTLLASQGHQFLRKWLIDHPNFLSNEVYIAGDSYAGIPLPAIVQEIAQGNEKGFQPSINLQGYILGNPITTRTEPNYAIPFAHGMALISDELYESLQKNCKGNFIDVDSENILCYRDMESFNKLVSRISIYNILEPWCESDHIVSPLRRSLIEKFPRKHFLKTDLKLPAVTCLTYTEFLSAYWANDDNVQTALHIHKGSIGTWIRCHRDSRFKYDILSSVEYHANLSRNGYRSLIYRYTRTYSNRMTFTTVKAAGHTAPLYKPEECFDMLSRWISKKAL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01223 397 Gene3D - 289 355 - -
Viun9g01223 397 Gene3D - 356 396 - -
Viun9g01223 397 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 105 IPR001563 GO:0004185|GO:0006508
Viun9g01223 397 Pfam Serine carboxypeptidase 356 393 IPR001563 GO:0004185|GO:0006508
Viun9g01223 397 Pfam Serine carboxypeptidase 104 354 IPR001563 GO:0004185|GO:0006508
Viun9g01223 397 SUPERFAMILY alpha/beta-Hydrolases 39 395 IPR029058 -
Viun9g01223 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 364 377 IPR001563 GO:0004185|GO:0006508
Viun9g01223 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 158 IPR001563 GO:0004185|GO:0006508
Viun9g01223 397 Gene3D alpha/beta hydrolase 105 258 IPR029058 -
Viun9g01223 397 Gene3D alpha/beta hydrolase 32 104 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01223 Viun-Chr9 11640589 11652765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01223 33 62 Calmodulin-binding Proteins AT2G22960 73.333 3.48e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01223 K16296 - gmx:100792006 509.22