Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01222 ATGTATGGAAGGGAACAACTTTTGGTGGCCTTCAAGAGTCAATCACAAGTGCCTTGGCTTGTAGAAAAGTACATGAAGAAGGTGGTTTGCTGTGTTTCTGCGATGAGAAGGTTTTCTACAACTAATCAGGGATGTGTTGCTGAAGCTAGAATGATGACTCCTGAGTTTTTTCCGGATAAATCAGAAGTTCAATGTCTTCACAGATGGAAAAAAGTTCTTAATCCTGAACTTGTTAAAGGACATTGGACAAAGGAGGAGGATGATAAAATAATTGAACTGGTGTCTATACATGGATCTACAAAATGGTCTTTGATATCCCAGTCTTTGCCTGGTCGAATAGGAAAACAATGCAGAGAACAATGGTGCAATCATCTTAGTCCAGACATAAAGAAGGATCCCTAG 402 0.3955 MYGREQLLVAFKSQSQVPWLVEKYMKKVVCCVSAMRRFSTTNQGCVAEARMMTPEFFPDKSEVQCLHRWKKVLNPELVKGHWTKEEDDKIIELVSIHGSTKWSLISQSLPGRIGKQCREQWCNHLSPDIKKDP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01222 133 SMART sant 78 127 IPR001005 -
Viun9g01222 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 129 IPR017930 -
Viun9g01222 133 Pfam Myb-like DNA-binding domain 79 125 IPR001005 -
Viun9g01222 133 CDD SANT 82 125 IPR001005 -
Viun9g01222 133 ProSiteProfiles Myb-like domain profile. 74 125 IPR001005 -
Viun9g01222 133 Gene3D - 76 131 - -
Viun9g01222 133 FunFam Transcriptional activator Myb isoform A 78 131 - -
Viun9g01222 133 PANTHER MYB PROTEIN-RELATED 79 133 - -
Viun9g01222 133 SUPERFAMILY Homeodomain-like 55 131 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01222 Viun-Chr9 11629226 11633922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01222 55 132 MYB Transcription Factor Family AT5G02320 74.359 3.35e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g01222 Myb_DNA-binding 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01222 K09422 - vun:114164107 283.878