Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01167 ATGAGTGTGAAACCCATCTGGGTATTCTTCAATTCCATCTTTTTGTTTCTTCTACTGGCCAATTCAGAAGAAGAAGACACGATCAAGGCCCTGGTCACATTCATGGATAAATTGGCACCAGGGTATGTAAAAGACCCTTCGTGGGGTTGGAACCTTTCATCAGATCCCTGCATTGATAAGTGGCACGGTGTGAAGTGCCATTCAGATAACAAATACGTTATGAGTGTGATTCTTGAGAACTTCAATTTTGGTGGAGGTTTAGACGCCGGTTCTATTTGCATTGCGAAGTCTCTTCAAATACTTAGCATAAAGGACAACAATTTACGTGATTCGATACCGGAGGATATAGGAAACTGCAAGTCATTGACTCACTTGTTTTTAAGTGGGAACCAATTCTCTGGAGATCTTCCTATTTCTATTGTCAATCTTAGGAACTTGATACGGCTTCATATTTCGGACAACCACTTAACTGGAGAGCTTCCCAACATGGTTCATGTTTCAAGTTTGAAATCCTTCGTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTCGTTTTGACTTCTCCAACCTTGAAGAGTTTAATGTCTCCAATAACAACTTACATGGTTCAGTTCCTGATGTCAGAGGTTACTTAGTCCTTGGTTTGATTACGCTGATTTTCTTGACCTATAAACTGTTATGTAAGTTGAAGACCAAAGAAAAAGAGTTGGATGTCGAAAAGAAGGAAAAGGCAGAAGAAAGTGTTGGTGTTGTTGGCATGGCTAGTGAAATATCCCATTCCAATGGATCAAAGAAGGGCGTTGGAATCAGATCGGAGTATTCATTGACATCTTTGGAAAGTGGGATGACAACATCAGGTCTTGTTCTTCTTTCTAGTCGAACCCTTCGAGGATTGCAATTTGAGGACTTGCTTGGTGCTCCTGCTGAATTGATTCGGAGGGGAAAGCACGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCAGTTGGCAGTGAAGAGGATTAAGGATTGGGGAATTTCTAAGCAAGATTTTCAGACAAGGATGAATATGATAGCCCAAGCCAAGCATCCACGCGTATTGCCACCTGTTGCATACTATTGTTCTCAGCAAGAGAAGCTCTTAGCATATCAATATATGCAGAATGGTAGTCTCTTCATGTTGCTCTATGCTGGATCTGAAAGTGGCCAGTCGTTTGACTGGGGAAGAAGACTAAATGTTGCGGCTAAGATAGTTGAGGCTTTGACATATATGCATGAGGAGTTTCTGGAGAATGGAATAGCACATGGTAACTTAAAGTCAAATAACATTTTGTTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGGCAGAAAATTATGATGAATTTGTCATTTCACACAACAAAGGCCTCAAAAGCAAAGATCTAATTGCAGCCAGGTTCAAAGCTGATGTATATGCCTTGGGTATGATACTTCTGGAGCTGCTGACAGGGAAAGTGATTAAAAATGACGGATTTGATCTAGTTAAATGGGTGAATACAGTGGTCAGAGAGGAATGGACCGTCGAAGTTTTTGACAAGTCCCTAGTCTTACAGGGTGCTTCGGAAGAGAGAATGATGAATTTGTTGCAGGTAGCATTAAAATGCTTAAATCCTTCTCCAAATGACAGGCCAAGCATGAGCCAAGTTGCAGTGATGACAAATGCTTTGGTAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 1746 0.4118 MSVKPIWVFFNSIFLFLLLANSEEEDTIKALVTFMDKLAPGYVKDPSWGWNLSSDPCIDKWHGVKCHSDNKYVMSVILENFNFGGGLDAGSICIAKSLQILSIKDNNLRDSIPEDIGNCKSLTHLFLSGNQFSGDLPISIVNLRNLIRLHISDNHLTGELPNMVHVSSLKSFVAQNNNFTGEIPRFDFSNLEEFNVSNNNLHGSVPDVRGYLVLGLITLIFLTYKLLCKLKTKEKELDVEKKEKAEESVGVVGMASEISHSNGSKKGVGIRSEYSLTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVQLAVKRIKDWGISKQDFQTRMNMIAQAKHPRVLPPVAYYCSQQEKLLAYQYMQNGSLFMLLYAGSESGQSFDWGRRLNVAAKIVEALTYMHEEFLENGIAHGNLKSNNILFDKNMDPCISEYGLMMAENYDEFVISHNKGLKSKDLIAARFKADVYALGMILLELLTGKVIKNDGFDLVKWVNTVVREEWTVEVFDKSLVLQGASEERMMNLLQVALKCLNPSPNDRPSMSQVAVMTNALVEEEEKSISFDT 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01167 581 FunFam Leucine-rich repeat receptor protein kinase EMS1 89 186 - -
Viun9g01167 581 Gene3D Transferase(Phosphotransferase) domain 1 381 580 - -
Viun9g01167 581 Gene3D Ribonuclease Inhibitor 23 266 IPR032675 -
Viun9g01167 581 Pfam Protein kinase domain 312 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01167 581 SUPERFAMILY L domain-like 33 223 - -
Viun9g01167 581 Gene3D Phosphorylase Kinase; domain 1 295 380 - -
Viun9g01167 581 ProSiteProfiles Protein kinase domain profile. 306 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01167 581 PANTHER OS05G0588300 PROTEIN 9 569 - -
Viun9g01167 581 SUPERFAMILY Protein kinase-like (PK-like) 310 564 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01167 Viun-Chr9 10185788 10187840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01167 47 562 Receptor kinase-like Gene Family AT1G48480 30.252 1.02e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun9g01167 Pkinase 6.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01167 - - pvu:PHAVU_009G180700g 942.569