Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01163 ATGCATGCAACAGTGCAGCCGGGTGGCCGTTCTCCTAAGCCTATGAGTAGTCCAACATCAACATCTCAACTAAAATCTGCTTCAGATAGTGTCCAGAACAGTACTTCTTCCTTTCCTTCTCACATTAAGGGGAGGAAAAGGGAAAGGGCAGATCAAGGCTCTGAGTCTGCCAAGCGAGAACGATCAATAAAAACTGAGGATGGGGATTCTGGTAATTTCAGGCATGATAACTTTTTCAAGACAGAGATTGCAAAAATTACTGAGAAGGGAGGGCTTGTTGATGGTGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAAATAGATTTAGCTAGCCGGTCATTGCTTGCAGCTGTCGTTGCAGCAACAGATAAGTTAGATTGTCTTAGTCAGTTTGTGCAGCAAAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGGAAGATTGGTGACGGTGATAAATCTGCAGAGGAATTTCTGTTGGTATTGCTTCGGGCACTTGATAAACTTCCAGTAAATCTTCAGGCTTTACAAACATGCAACATTGGAAAATCTGTGAATCATCTGCGAAGTCACAAAAATGCTGAAATTCAGAGGAAAGCAAGAGGTTTAGTTGATACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAATGATGCAAAGTCTGGTTCAGGTCCCAATGTCCACTGGCCTGCCAAATCACGTCCTTCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATCATCAGATGTTGCCATGAAGAGTTCAGTTACGCAGCTTTCTGCTTCCAAGACCACTTCTGTGAAGGTTGTCCAGGGAGAGAATATTACTAGATCTGCATCAACATCTGCATTTCCAGGGCCTGCAAAATCAGTGCCGTCACCTGCAGCTGTGACTGCAAATTTAAAAGATGGTCAGCCTCGTATTGTTGCTGTCAATGGAGGTTCTGATCTTCCCATGGCAAATGTAAGGGATGAGAAAAGTTGTAGTTCTAGTCAATCTCACAACAACAGTCAATCTTGTTCTAGTGACCATGCTAAAACTGGAGGTCACTCTGTAAAGGAAGATGCCAGAAGCTCTACTGCAATGAGTGCGAATAAGATTTCTGGAGGCTCTTCACGACATCGAAAATCCATTAATGGATTTTCAGGTTCATCTCCATCTGGAGGGCAAAGGGAAACTGGATCAAGCAGGAATTCCTCCTCGCACAAAAATATAACTTCAGAAAAGATATCTCAACCTGGATTAATGGATAAAGCAGTTGATGGAACTTCTCTTGAGGGTAATATTCCAAAGCTGATTGTTAAAATTCCAAATCAAGGTAGAAGTCCTGCACAAAGTGTCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCCTCATCTCCTGTTCTTCCCGAGAAGCATGATCAGTCTGATAACAGCCCAAAGGAAAAGAACGACCTTTATCGAGTAAATATTGGCTCAGATATTAATACTGAATCTTGGCAGAGTAATGATTTTAAGGAGGTATTGACTGGCTCTGATGAGGGTGATGGGTCACCTGCTGCAGTTACTGATGAAGAGCACTGTCGCACTGGCAATGATTGTAAGAAGGCATTGGAGGTATCAAAAGCTGCCTCATCATCATCTGGAAATGAAAATAAAGCTGGCAATTTGCAGGATGCTTCCTACAGCTCAATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGATGGTGGAATGAATCTTCTTGCTAGTGTGGCTGCTGGAGAGATATTGAAATCTGAATTGTTAACTCCAGCTGGATCTCCAGAAAGAAACACACCTACTGTTGAACAGTCATGCACAGACAATGGTGTTAAGTGCTCTGAAGAAAATCTTGTTCGTGATGAATGCCACTCAAATAATGGTCTTGATGTTGAACATAAGAATCTGGCTTCTGTAACAGGTGATTTAGGGGCAAATGATGAAAGCGATTCTGATTTTCAAGCTTCTGGAGGGAAAGCTGCAAGAGAGCTAAATAAGCGTGTTAATGCATGTACTATGGATTTACAACAGGTTGCTGAAACTATGGAAAGCAAAGGAAAATTAAATGAAAAATCTGGACCTACTTCACTGGGTGGTTTTGCTGAAAGTTCTGTACAAGAAGCTGGAAATGGTGATGGAAGCAAGCAGCTACAGGAGGTTGTTCAGGGAGTGAATTCTGGCGAAATTCATGATAAGATCAATTGTGTTGCAGACGTTGAGGCAGAAGTATCTAAAAAATTGTCAAATACAGCTGTTGAAGTGGATGTACAGAGTGATAACTGTGCTGAAGGATCAAGTGGCAGTGGACAGACAGTTAAAAGGCCTCCTGCTATACTTGTTCAGTCTGATTTGGCAAGAGGAAAAGATGATAATGGACTCCATTCTTCTGGTTCTGGTGTTGACAAGGTTCCTAAAGACTGCCCTGAACGGGAATCTGACAAAACTGATGATGTTGATGCTGAGAATCATGTCAATCAGTCTAGAAGTAAAAGAAATGAGTCTGAAAGTGATTCCTTGACCATGCCTGAGAATAGAGGTACATGTTCTATTGTGACTGGTCTTGTTGCTGAACATGTAGAGGAGAATTTAGAAACAAAAATTGTTCGTGACCAACCTTCTAGAGAGGATCTTCCTGAAGATTCACCTGGTGTTGTTTCACAAGAAATCAATAAGCATCACGATTCTAAAAGGTTGAAGTTGACGTCCTCAGAAGCAGAGGAGGCTGAGGAGTGCACCTCTACCACTGCAGATGCTTCTTCCATGTCTGCTGCAGCTGTGTCAGATGCGGATGCAAAGGTCGAATTTGATTTAAATGAAGGGCTCAATGCAGATGATGGAAGATGTGAGTTCAATAGCATTGCCAATTCTGGATGTGCACCATCTGGTCGATTGATCAGTCCTGTCCCATTTCCTGCTTCATCTATGTCCTGTGGTATTCTTGCCCCAGTCACTTTGGCGTCTGCAGCTAAGGGGCACTTTGTGCCTCCTGAAGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCCACCAGTGCATTCAGGCCAGCTGAACCCAGGAAAGTTATGGAAATGCCTTTTGGTACATCAGCTACCCCTATTCCTGATGCTCCAGCTGGAAAGCAGAGTCGAGCACCATTGGATATTGACTTGAATGTGGCCGATGAAAGAATACTTGATGACATTTCTTGTGCTCGACACACAAATTCTATATCTCTTGCAACTGATAGTCATGATCCTGTATGCAGTAAAATACCTTCACCTGTTCGCAGCTCTGGAGGGCTTGGTCTTGACTTAAACCAAGTGGATGATGCTTCCGACATGGGCATTTGCTTGAACATTAATCATAAAATTGATGTGCCAACTATGCAGGGGAAGTCATCATTGGGTGGTCCACCAATTAGAGAAGTGAATGTGCATAGGGACTTTGATTTGAACAATGGACCTTCTGTTGAGGAAATCACCACTGAATCCTCATTGTTCTCTCCGCACGCCAGGAGCAATGTGACATCTCAATTACCTGTTTCTGGACTTAGAGTGGCTACTGCTGAGCCAGGCAACTTCTCTTGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGTGATCAACCCTTTTCAATTGTTGCTCCTAATGGGCCACAAAGGTTGTTGACTCCCGCTGCTGGTGGCAACCCATTCGGACCTGATATTTATAGGACCCCAGTATTGTCATCTTCTCCTGCAGTGTCATATCCATCTGCTCCATTTGAATATCCCGTCTTCCCTTTTAACTCCAGCTTCCCTCTTCCATCAGCTTCGTTTTCTGCTGGGTCAACTACTTATGTATATCCAACATCAGCCAATCGGCTTTGCTTCCCTGCAGTAAATTCACAGTTAATGGGGCCTGCTGGCACAGTTTCATCTCACTACCCCAGGCCCTATGTTGTTGGTCTTCCGGAAGGTAACAATAGTGGTAGTGCTGAGACCAGTAGAAAATGGACAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGGTGTTCAGAAATGGAGGGGAGAGATGAGAGTTCACCTCTTCCATCTAGGCAACTTTCTGTTGCTAGTTCACAGGCCCTAGCTGAGGAGCAAGCAAGGATTCAGCTTGCAGGTAGTGTTCGGAAGAGGAAGGAGCCTGATGGTGGGTGGGATGGCTACAACCAATCCTCATGGCAATAG 4296 0.4355 MHATVQPGGRSPKPMSSPTSTSQLKSASDSVQNSTSSFPSHIKGRKRERADQGSESAKRERSIKTEDGDSGNFRHDNFFKTEIAKITEKGGLVDGEGVEKLVQLMVPDRNEKKIDLASRSLLAAVVAATDKLDCLSQFVQQRGLPVFDEWLQEVHKGKIGDGDKSAEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRSHKNAEIQRKARGLVDTWKKRVEAEMNINDAKSGSGPNVHWPAKSRPSDVGQGGNRHSGASSDVAMKSSVTQLSASKTTSVKVVQGENITRSASTSAFPGPAKSVPSPAAVTANLKDGQPRIVAVNGGSDLPMANVRDEKSCSSSQSHNNSQSCSSDHAKTGGHSVKEDARSSTAMSANKISGGSSRHRKSINGFSGSSPSGGQRETGSSRNSSSHKNITSEKISQPGLMDKAVDGTSLEGNIPKLIVKIPNQGRSPAQSVSAGSFDDPTIMNSRASSPVLPEKHDQSDNSPKEKNDLYRVNIGSDINTESWQSNDFKEVLTGSDEGDGSPAAVTDEEHCRTGNDCKKALEVSKAASSSSGNENKAGNLQDASYSSINALIEGVKYSEADDGGMNLLASVAAGEILKSELLTPAGSPERNTPTVEQSCTDNGVKCSEENLVRDECHSNNGLDVEHKNLASVTGDLGANDESDSDFQASGGKAARELNKRVNACTMDLQQVAETMESKGKLNEKSGPTSLGGFAESSVQEAGNGDGSKQLQEVVQGVNSGEIHDKINCVADVEAEVSKKLSNTAVEVDVQSDNCAEGSSGSGQTVKRPPAILVQSDLARGKDDNGLHSSGSGVDKVPKDCPERESDKTDDVDAENHVNQSRSKRNESESDSLTMPENRGTCSIVTGLVAEHVEENLETKIVRDQPSREDLPEDSPGVVSQEINKHHDSKRLKLTSSEAEEAEECTSTTADASSMSAAAVSDADAKVEFDLNEGLNADDGRCEFNSIANSGCAPSGRLISPVPFPASSMSCGILAPVTLASAAKGHFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMPFGTSATPIPDAPAGKQSRAPLDIDLNVADERILDDISCARHTNSISLATDSHDPVCSKIPSPVRSSGGLGLDLNQVDDASDMGICLNINHKIDVPTMQGKSSLGGPPIREVNVHRDFDLNNGPSVEEITTESSLFSPHARSNVTSQLPVSGLRVATAEPGNFSWLPSSGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRLLTPAAGGNPFGPDIYRTPVLSSSPAVSYPSAPFEYPVFPFNSSFPLPSASFSAGSTTYVYPTSANRLCFPAVNSQLMGPAGTVSSHYPRPYVVGLPEGNNSGSAETSRKWTRQGLDLNAGPGCSEMEGRDESSPLPSRQLSVASSQALAEEQARIQLAGSVRKRKEPDGGWDGYNQSSWQ 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01163 1431 MobiDBLite consensus disorder prediction 888 918 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 453 485 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 520 539 - -
Viun9g01163 1431 ProSiteProfiles TFIIS N-terminal domain profile. 145 225 IPR017923 -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 322 436 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 1385 1402 - -
Viun9g01163 1431 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 97 226 IPR035441 -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 1 71 - -
Viun9g01163 1431 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 236 IPR035441 -
Viun9g01163 1431 CDD TFIIS_I 158 223 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 338 360 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 1349 1431 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 1350 1364 - -
Viun9g01163 1431 Pfam TFIIS helical bundle-like domain 173 222 IPR017923 -
Viun9g01163 1431 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1431 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 41 71 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 825 860 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 228 262 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 450 498 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 368 425 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 10 40 - -
Viun9g01163 1431 SMART TFS2_5 151 224 IPR003617 GO:0005634
Viun9g01163 1431 MobiDBLite consensus disorder prediction 704 735 - -
Viun9g01163 1431 MobiDBLite consensus disorder prediction 809 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01163 Viun-Chr9 10144480 10151372 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Viun9g01163 Med26 5.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01163 - - gmx:100788512 2266.5