Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01137 ATGGCTGCCGCCGGTGATGTTTTCCTGCCGGAAGTGGGTGCCGGAAAGCTGCACGTGCTTGCCGTTGATGACAGCCACGTCGACCGCAAGGTTATTGAGCGGTTGCTCAAAATCTCGTCTTGCCAAGTGACGGTGGTGGAAAGTGGAAGCAGGGCTCTGCAGTATCTGGGGTTGGATGGAGAGAAGAGCTCCATTGGTTTTGATAGTGTCAAGGTTAATTTGATAATGACAGACTACTCCATGCCGGGGATGACAGGCTATGAACTGCTCAAGAAGATAAAGGAATCATCTGTGTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAGTTGTCAGATGTAAAACGCGTTACAGATTTCATCATGAAAGGGGAAGGGAAGAAAGGAGTAAAAAAAAGCCATAAAAGAAGTAGATCAGATGATTACAGCCCTCCATCATCATCATCATCATCATCTATTTCAACTGCGTTCTCATCAGTTTCTCATCCCTGTGATCTATCATTGCCTGCATCACCTTCTTCTGCATTGCTCTCAAAGAAAACCAGATTGAGCATATAG 627 0.4561 MAAAGDVFLPEVGAGKLHVLAVDDSHVDRKVIERLLKISSCQVTVVESGSRALQYLGLDGEKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMKGEGKKGVKKSHKRSRSDDYSPPSSSSSSSISTAFSSVSHPCDLSLPASPSSALLSKKTRLSI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01137 208 MobiDBLite consensus disorder prediction 151 185 - -
Viun9g01137 208 SMART REC_2 17 141 IPR001789 GO:0000160
Viun9g01137 208 MobiDBLite consensus disorder prediction 165 185 - -
Viun9g01137 208 Pfam Response regulator receiver domain 19 138 IPR001789 GO:0000160
Viun9g01137 208 SUPERFAMILY CheY-like 16 144 IPR011006 -
Viun9g01137 208 CDD REC_typeA_ARR 19 140 - -
Viun9g01137 208 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Viun9g01137 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 170 IPR045279 GO:0009736
Viun9g01137 208 Gene3D - 16 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01137 Viun-Chr9 9605942 9608014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01137 17 159 Response Regulator Gene Family AT5G62920 77.622 2.53e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun9g01137 Response_reg 8.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01137 K14492 - gmx:100819165 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01137 9 9605942 9608014 Viun9g01137 9 9605942 9608014 ECH