Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01136 ATGTCAGCCTCCACTCATGCAATTGCAGAGGCTGTGCTTGCCACAGCTGGGGCTATGCTACTTATTGCTGCTGTTTTTGTTTACTTCTTTCACAGATTTGTGATTTCTAGATACCGCCAGAGAAACAAAATTGGAACAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGGTTAATAGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGGTGGACACAGAAAGAAGACCTTTGATAACTGGATTCCAAAATAGTATACTCAATCCGAGTTTCGAACATGATGAGGACGAGAAAAGAATAGATATAATGGTCCAAAGGTCCAAACTTTTCAAGCCTGAAATTCCACAGCCATGTCAATCTCCGAGCTTGGTTGTTCATGAGGATCATCAAGTAAAAACAGAATCACAAACACCATCAGTTTCAACATCATTAACACCAAGACAAAACCTCCCACAATCACCTCAGCTAGCACCATCACCACCACCACCACCACCACAATCTTCACCAATTATTCTTGAGAGCAAGAAAACTCAACCACCACCACCTCCTCCTCCTCCTCCTACTCGTCCTCCACCACCACCACCAGGTCCACCCCCTCTTCCAAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCTGCACCCAAAGGGAAAACAAACATAAGAAGCACCAAAGAGGGTGTGGCAGGGGAGAGTTCAAGAGAGAAGGGTGTTGCTCAAACAAGGCTCAAGCCTCTACACTGGGATAAGGTTGTAGCAAATGTTGATCATTCAACAGTATGGGATCAGATCAATGATGGTTCTTTCAGGTTTGATGATGAATTGATGGAATCACTCTTTGGATATTCAAGTAGCTATAAAACACAAGAAAGAAACAGAACTCTTTCCACTTTGGCCAAGTCCAATTCCAGTGCACCAACTCAAATATTCATTCTTGACCCAAGAAAATCTCAAAACACTGCCATTGTGCTAAGATCACTTGCCATTTCTCGCAAAGGAATCTTGGATGCTGTTCTTGATGGTCAAGGTCTAAGTGTTGAGACGCTTGAAAGACTCACTAAAATAGCTCCCACCCAAGAAGAGGAAGCAAAAATCATCCAATTCAGTGGCAACCCGGATCAACTTGCTGATGCAGAGTCTTTCCTGCACTACATTCTTAAAGCAGTTCCAACAGCATTCAACCGTTTGAAGGCGATGCTTTTCAGGTCGAGTTATGATTTTGAAGTTCTTCAGCACAAGGAACAACTACAATCGCTTGAAATGGGTTGCAAGGAACTGAGAACTAGTGGTCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAGGCTGGGAATCGTATGAACGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGTGCTCTTAGAAAACTTTCTGACGTGAAAAGCACAGATGGGAAAACTAGTTTGCTTCATTTTATAGTAGAACAAGTGGTTCAGTCAGAAGGAAAAAGACAAGCTCTCTATCGAAAGCACAAACTTCACACAAGCAATGTTGAAGCAAACACTGTGAATAGAGGTTATTCATATAGCCAGATACAGCTAGAGGAAGATAAAGAACGCACAATGCTTGGTTTGCAAGTGTTACGTGGGCTAAGTGATGAGTTATCTGAAGCAAAGAAAGCAGCTAGTATTGAGTATCACAATTTTATCACAATGTGTTCCACTCTGAATGCTCATGTCAGTGAAATTAGACAGATTGTAACGTGTTGTGGCTACACCAGGAGTGGTGGATTTATCAACGAAATGAAAGGGTTCCTTGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAAACAAGGATCATGGAGCTTGTGAAGAAAACAAATGATTACTATCTTGCAGGAGCGTCGAAAGACAACATGGTAAACCCCTTTCAACTGTTTGTTATTGTGAAGAATTTTGTTGACATGGTTGATCAGGCTTGCACAGAACTAAAAAGGAAGGTGGAAAAGAAGAATGTGGGAGGAGAAGCTGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGGCACCACTGAGATTCCCTAACTTTGATATGTATTTTCTGTCAAATGTGTCAGAAACTTCATCTTCTAGCCAGTCAGAAGATGATTTCTGA 2169 0.4223 MSASTHAIAEAVLATAGAMLLIAAVFVYFFHRFVISRYRQRNKIGTSLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVVDTERRPLITGFQNSILNPSFEHDEDEKRIDIMVQRSKLFKPEIPQPCQSPSLVVHEDHQVKTESQTPSVSTSLTPRQNLPQSPQLAPSPPPPPPQSSPIILESKKTQPPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGVAGESSREKGVAQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTQERNRTLSTLAKSNSSAPTQIFILDPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLHYILKAVPTAFNRLKAMLFRSSYDFEVLQHKEQLQSLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQALYRKHKLHTSNVEANTVNRGYSYSQIQLEEDKERTMLGLQVLRGLSDELSEAKKAASIEYHNFITMCSTLNAHVSEIRQIVTCCGYTRSGGFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNDYYLAGASKDNMVNPFQLFVIVKNFVDMVDQACTELKRKVEKKNVGGEAVSTTPPLSPSKRAPLRFPNFDMYFLSNVSETSSSSQSEDDF 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01136 722 PANTHER FORMIN-RELATED 5 705 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun9g01136 722 SMART it6_source 247 676 IPR015425 -
Viun9g01136 722 ProSiteProfiles Formin homology-2 (FH2) domain profile. 245 687 IPR015425 -
Viun9g01136 722 MobiDBLite consensus disorder prediction 124 251 - -
Viun9g01136 722 MobiDBLite consensus disorder prediction 145 163 - -
Viun9g01136 722 SUPERFAMILY Formin homology 2 domain (FH2 domain) 258 675 - -
Viun9g01136 722 Coils Coil 600 620 - -
Viun9g01136 722 Gene3D Formin, FH2 domain 267 680 IPR042201 -
Viun9g01136 722 MobiDBLite consensus disorder prediction 164 213 - -
Viun9g01136 722 Pfam Formin Homology 2 Domain 252 661 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01136 Viun-Chr9 9597097 9599835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01136 8 720 FH2 protein (formin) Gene Family AT1G70140 41.310 7.20e-160 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01136 - - gsj:114409782 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01136 9 9597097 9599835 Viun9g01136 9 9597097 9599835 ECH