Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01132 ATGCCTCTCTCCTCCGCCACCGCTCCTCACTCTGCCTCATCCGCCGAGATCATGCTGTTCGGAGTCAGAGTCGTCGTCGACTCCATGAGGAAGAGCGTCAGCATGAACAACCTCTCCCAGTACGATCACCATCGCGATACCGCCGCCGCCGCCAAAGACGACGCCGCCGGCTACGCCTCCGCCGATGACGCCGCTCCGAACAACTCCGGGAAAAACCGCGACCGCAAGCGAGGGATTCCATGGACGGAGGAAGAGCACAAGCTGTTCTTGGTTGGGTTGCAGAAAGTGGGGAAAGGTGACTGGAGAGGAATCTCAAGGAACTATGTCAAGACACGGACACCAACTCAAGTTGCTAGCCATGCTCAGAAGTACTTTCTCCGCCGTACCAACTTCAATCGCCGTCGCCGTAGATCCAGCCTCTTCGACATAACCACCGATTCGGTCTCTACAACCCCGATGGAAGAAGGAGAGATCCAGCATGAAGATAATGTGTCTCTTGTGCATCCCATGTACCCTGTTACGGGTGAAGGAAGCAACATGAACGGATTTTCAATGTTGCCTATGTATTCGAAGGACATTGCTGAAGCTGGGAATCCAATGAAAATACTTACTTTGGGACAAGGAAATAATGTGGAACAGAATGGGCCTTGTACTAAGCTAGTTTGCACAACACCCCCAATTGTTCCAGCGTCTGATATCACTGCCACCAGTTTAAGTTCAGTTGATCCACCAACACTGTCTCTCGGGTTATCTTTGTCATCTACTCAAAGACAAACTTCATCAATACATTCAGCTTTTCATTCACTCTCGCGTTTCAACAATGGAGATAGCGTCATAACCGTTGCTTAG 849 0.5077 MPLSSATAPHSASSAEIMLFGVRVVVDSMRKSVSMNNLSQYDHHRDTAAAAKDDAAGYASADDAAPNNSGKNRDRKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNFNRRRRRSSLFDITTDSVSTTPMEEGEIQHEDNVSLVHPMYPVTGEGSNMNGFSMLPMYSKDIAEAGNPMKILTLGQGNNVEQNGPCTKLVCTTPPIVPASDITATSLSSVDPPTLSLGLSLSSTQRQTSSIHSAFHSLSRFNNGDSVITVA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01132 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 129 IPR017930 -
Viun9g01132 282 Gene3D - 79 131 - -
Viun9g01132 282 FunFam transcription factor MYB1R1 79 130 - -
Viun9g01132 282 CDD SANT 80 125 IPR001005 -
Viun9g01132 282 MobiDBLite consensus disorder prediction 52 79 - -
Viun9g01132 282 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Viun9g01132 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 76 127 IPR006447 GO:0003677
Viun9g01132 282 SMART sant 77 127 IPR001005 -
Viun9g01132 282 ProSiteProfiles SANT domain profile. 81 129 IPR017884 -
Viun9g01132 282 SUPERFAMILY Homeodomain-like 75 129 IPR009057 -
Viun9g01132 282 PANTHER TRANSCRIPTION FACTOR KUA1 14 174 - -
Viun9g01132 282 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01132 Viun-Chr9 9489833 9492830 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g01132 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01132 - - gmx:778057 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01132 9 9489833 9492830 Viun9g01132 9 9489833 9492830 ECH
Viun3g04499 3 52740803 52742783 Viun9g01132 9 9489833 9492830 PCT