Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01131 ATGCCTCTCTCCTCCGCCACCGCTCCTCACTCTGCCTCATCCGCCGAGATCATGCTGTTCGGAGTCAGAGTCGTCGTCGACTCCATGAGGAAGAGCGTCAGCATGAACAACCTCTCCCAGTACGATCACCATCGCGATACCGCCGCCGCCGCCAAAGACGACGCCGCCGGCTACGCCTCCGCCGATGACGCCGCTCCGAACAACTCCGGGAAAAACCGCGACCGCAAGCGAGGGATTCCATGGACGGAGGAAGAGCACAAGCTGTTCTTGGTTGGGTTGCAGAAAGTGGGGAAAGGTGACTGGAGAGGAATCTCAAGGAACTATGTCAAGACACGGACACCAACTCAAGTTGCTAGCCATGCTCAGAAGTACTTTCTCCGCCGTACCAACTTCAATCGCCGTCGCCGTAGATCCAGCCTCTTCGACATAACCACCGATTCGGTAAGTTCTGTTCAGGTCTCTACAACCCCGATGGAAGAAGGAGAGATCCAGCATGAAGATAATGTGTCTCTTGTGCATCCCATGTACCCTGTTACGGGTGAAGGAAGCAACATGAACGGATTTTCAATGTTGCCTATGTATTCGAAGGACATTGCTGAAGCTGGGAATCCAATGAAAATACTTACTTTGGGACAAGGAAATAATGTGGAACAGAATGGGCCTTGTACTAAGCTAGTTTGCACAACACCCCCAATTGTTCCAGCGTCTGATATCACTGCCACCAGTTTAAGTTCAGTTGATCCACCAACACTGTCTCTCGGGTTATCTTTGTCATCTACTCAAAGACAAACTTCATCAATACATTCAGCTTTTCATTCACTCTCGCGTTTCAACAATGGAGATAGCGTCATAACCGTTGCTTAG 864 0.5058 MPLSSATAPHSASSAEIMLFGVRVVVDSMRKSVSMNNLSQYDHHRDTAAAAKDDAAGYASADDAAPNNSGKNRDRKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNFNRRRRRSSLFDITTDSVSSVQVSTTPMEEGEIQHEDNVSLVHPMYPVTGEGSNMNGFSMLPMYSKDIAEAGNPMKILTLGQGNNVEQNGPCTKLVCTTPPIVPASDITATSLSSVDPPTLSLGLSLSSTQRQTSSIHSAFHSLSRFNNGDSVITVA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01131 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 129 IPR017930 -
Viun9g01131 287 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Viun9g01131 287 CDD SANT 80 125 IPR001005 -
Viun9g01131 287 MobiDBLite consensus disorder prediction 52 79 - -
Viun9g01131 287 SUPERFAMILY Homeodomain-like 75 129 IPR009057 -
Viun9g01131 287 NCBIfam myb-like DNA-binding domain, SHAQKYF class 76 127 IPR006447 GO:0003677
Viun9g01131 287 FunFam transcription factor MYB1R1 79 130 - -
Viun9g01131 287 SMART sant 77 127 IPR001005 -
Viun9g01131 287 ProSiteProfiles SANT domain profile. 81 129 IPR017884 -
Viun9g01131 287 PANTHER TRANSCRIPTION FACTOR KUA1 14 179 - -
Viun9g01131 287 Gene3D - 79 131 - -
Viun9g01131 287 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01131 Viun-Chr9 9489833 9492833 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g01131 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01131 - - gmx:778057 360.533