Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01125 ATGGTGAGGTCTCCTTGTGAAAAAGTCAATGCCAAAAGGGGTGCGTGGACGACAGAAGATGACACAAAGAACCTTGCTTTTGGTTCCAAGCATGGATCTGGGGTGAAGAGGTGTGGAAAGAGTTGTAGGCTCAGGTGGAGTAACTGCCACAGGCCTGATCTTAATAAGCACGACAATTTCACAACCCAGGAAGAAGATCTAATCATTAAACTTCACGCAGCCATAGGTAGCAGGTGGTCTATTATAGCCCAACAACTTCCTGGGAGAACAGACAACGATGTAAAGATATACTGGAACACAAAGCTGAAAAAGAAACTCTCTCAAATGGGGATTGATCCTGTTACCCACAAGCCCTTTTCTAAACTCATTGCTGACTATGGAAACATCGGAGGTTGCCACAAACCAAGTACCAGAATAGGGTCTATCAATAAAGACTTCAAGAGTGCAATGATGCTGAAATCAGAAACCATGGCACAGGGATTTACAAACATAAATGACCAACCAAAGCTACCACTTCAAATGGAAAACAATGGAAACAACTTTTTATTCAACAGATCAATGGATCTCGCGCAGTTCCAATCCATACCAATGGCGTCACGCGCCTCAAATTGCACAGACTTTGAGAATGAGATGATGTCAGGATCTGTGTTAGGGGAAGATCGTTTGTCAAAAACCTCATCTCCTTCTACTCCTTCTACTTGTTCCACTTCAGGTTTTAGTTGGAATGAGTTCCTTCTAGAAGATGCTTTCACACCACTTGATCAATACCAGGAAAAAGACACCCTGGTTTCGAAGGAGAATGTGGCGACCAGACAGAGTTGGAATAATAAAGAGGTTAAGTCGCAGCATGCCTCAGGTAGTGACTTCCAATTTTCATCATTCATAGACGCCATGCTTGATCAAGAAAATGAAATGTTTCTGAGTTTTCCTCACCTTATGGAGGAACCATCCAACTTGAGTTAA 963 0.4268 MVRSPCEKVNAKRGAWTTEDDTKNLAFGSKHGSGVKRCGKSCRLRWSNCHRPDLNKHDNFTTQEEDLIIKLHAAIGSRWSIIAQQLPGRTDNDVKIYWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGCHKPSTRIGSINKDFKSAMMLKSETMAQGFTNINDQPKLPLQMENNGNNFLFNRSMDLAQFQSIPMASRASNCTDFENEMMSGSVLGEDRLSKTSSPSTPSTCSTSGFSWNEFLLEDAFTPLDQYQEKDTLVSKENVATRQSWNNKEVKSQHASGSDFQFSSFIDAMLDQENEMFLSFPHLMEEPSNLS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01125 320 CDD SANT 59 102 IPR001005 -
Viun9g01125 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 106 IPR017930 -
Viun9g01125 320 FunFam Os07g0634900 protein 59 118 - -
Viun9g01125 320 ProSiteProfiles Myb-like domain profile. 56 102 IPR001005 -
Viun9g01125 320 Pfam Myb-like DNA-binding domain 59 100 IPR001005 -
Viun9g01125 320 PANTHER F14D16.11-RELATED 1 317 - -
Viun9g01125 320 SMART sant 12 52 IPR001005 -
Viun9g01125 320 SMART sant 56 104 IPR001005 -
Viun9g01125 320 SUPERFAMILY Homeodomain-like 36 110 IPR009057 -
Viun9g01125 320 Gene3D - 58 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01125 Viun-Chr9 9439131 9440611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01125 1 315 MYB Transcription Factor Family AT3G28470 38.253 1.31e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun9g01125 Myb_DNA-binding 4.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01125 K09422 - gmx:100795381 452.981