Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01123 ATGTCCCAAGGATCTCCCCCGCAGGACAGCAAAGAACCCTCGCCCGATTTGCACAAGGAGGAAGCAACCACCAACACCGCCGCTACTGCTGCCGCTGATGCTGCTCCTCCCGCCCCCACCCGGAACCGTCCCTCTCGCGCCTGTACCATTCGTACGGCTGCACGCCTCTACTCCGCGTCGCAGCCAGCAAGGCCAAAGGCTGCAAAGAGGGAGCCTCGCCGCGAGGAGTCGCCCCAGCCTCCGTCGCCACAGCCGCAGCAATGCAGCAAGATCGTGACGCCGTTGGTGGAACCGCCCACGCCTGCACAGTTGCCGCGTTACAACCTCCGGTGCATGTGGGAATTGGCTTCAATACTCAATTTTTTTAATCTTTTTAGGCATCTTTTGAATATTTCAGTAGAATTCTCGGCTGAAGAGTTTGAGACGGCTTTGCTCACTCCCAATGACACATTGAGTGATATACATATGCCTTTGCTAAAGGCCATTCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATAACGGTATTATGCAGAAAGTTAAGAGATTGGTGGCACTGGGTTGCGGATGGGGATCTTCCTATTGTTGCTTCACATGGAGCGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGAGTTGAGCAAGAAGATATCAGGAGTTACATTGACAGCTCAATCAAGCATGGCATTCCACTTTCAACATTTCGCAAGGAGCGTATTGGTGGTGATTCACATGGAGTTTCTTATTGGTATGAAGATGACCAAAATATTGGTCAGAGGTTGTATCGGGAGATAAGGAAAACTGAGGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCTGGATGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAACGGAGGTTTCTGTGGGGAAGAAGGTGAAGATAGACATGCTTCCTGAAATTGAGAAGGTTCACAAGAGAAAGGAGAAATTGATGAAAAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTAGGTGTTGATGGGCTTGCCCTAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTCGATGATTATGATCGGTCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCGTCCCCAGAAGCTATACCAAGAAGAGAACCAGGATCAAAACCCGAAGCTTTATCCAATGGTAAATGGAGTGGTCCTTCCCCTTCGCATGACCCTCAAGATCTCAATTTTGGCACGCTATCTCCAAAATCACCAGACTTCGATGATATGGAGGAAGATAATCAAGCTGACATACTGGACTTGGATCGAAGCAATCGACGAAGACAGAAGCCTAAACGGTATTCAGAGAAAGAGTTTGTTGAAGCTTTGTCAGATAATGAGGCTGACTATGACAGTGATGATGATATCGTGGGAGAAGCAGTGTATTCTGAAGAGTATCTTCAGAAACGCAAGCAGAGAAGGAAGGCTTCTAGTAGCTCTGGCTCTGAAGGAGATGAAGAATATAATTGGAATGAAGATAATGTTGAAGATGAAGAAGAAGATGATGAAGATTCCATGAGTGTCAGTGAGGAGAGTGACAAGCCCCGGAAATTCAAGCGACTGGCAGGCCGGACTAGGAGGGAAACAAAACTCAGGTCTGTGGGTGAGATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACACAAAAACGTATAAATTACCGGCAGTTAGAGATGTCTGATTCAGAAACCGAGTTCGTTAAACCTGACAAGTCTAATGCATCAGATGATCACTCAGATCCTTCTGAGGAGAATGGAGATTACATGATGGAAAGTGAAGATTCAGATGGCAATGACGATGAAGAACAAGAAACTAAAGATGTGGAGCCTGTTACTTACCACCCTGCCGAAGGGAACAACAACCAATATCCTGCTGTAGAGGAGAATGATGAACAAAGCAAAATCCAGCCTCCTGAAAAATCTAGTAGTCCAGGTCAGGAGGAAGTTGAAGGCACCACAAAGCGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGATGATGCTCCGAATACAACAACAACCAAAGATGAAGGCAATGATGATTTGTGA 2211 0.4582 MSQGSPPQDSKEPSPDLHKEEATTNTAATAAADAAPPAPTRNRPSRACTIRTAARLYSASQPARPKAAKREPRREESPQPPSPQPQQCSKIVTPLVEPPTPAQLPRYNLRCMWELASILNFFNLFRHLLNISVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDSSIKHGIPLSTFRKERIGGDSHGVSYWYEDDQNIGQRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFLDVSEKLFTSKNRTEVSVGKKVKIDMLPEIEKVHKRKEKLMKKQHRQALLLDNFLGVDGLALGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPEAIPRREPGSKPEALSNGKWSGPSPSHDPQDLNFGTLSPKSPDFDDMEEDNQADILDLDRSNRRRQKPKRYSEKEFVEALSDNEADYDSDDDIVGEAVYSEEYLQKRKQRRKASSSSGSEGDEEYNWNEDNVEDEEEDDEDSMSVSEESDKPRKFKRLAGRTRRETKLRSVGEIQSGLRRSKRATQKRINYRQLEMSDSETEFVKPDKSNASDDHSDPSEENGDYMMESEDSDGNDDEEQETKDVEPVTYHPAEGNNNQYPAVEENDEQSKIQPPEKSSSPGQEEVEGTTKRRFLDLNELAPSSGFDDAPNTTTTKDEGNDDL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01123 736 MobiDBLite consensus disorder prediction 665 679 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 404 421 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 404 736 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 536 558 - -
Viun9g01123 736 PANTHER REMODELING AND SPACING FACTOR 1 41 731 IPR028938 GO:0006355|GO:0031213
Viun9g01123 736 MobiDBLite consensus disorder prediction 430 450 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 636 656 - -
Viun9g01123 736 Pfam DDT domain 117 162 IPR018501 -
Viun9g01123 736 MobiDBLite consensus disorder prediction 606 635 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 514 531 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 495 510 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 1 89 - -
Viun9g01123 736 MobiDBLite consensus disorder prediction 467 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01123 Viun-Chr9 9376017 9384699 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Viun9g01123 DDT 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01123 - - gmx:100816258 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04513 3 52882285 52889604 Viun9g01123 9 9376017 9384699 PCT