Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01117 ATGGGCATGGACTACTACAACATACTCAAAGTGAATCGCAACGCCAGCGACGAGGATTTGAAGAAAGCGTACAAGCGGCTAGCCCGCATATGGCACCCCGACAAGAACCCCGTCAACAAGAGTGAGGCGGAGGCCAAATTCAAACGAATCTCCGAAGCCTATGATGTCCTCAGTGACCCTCAGAAGCGCCAGATCTACGATCTCTACGGCGAGGAGGCTCTCAAATCCGGCCAGTTTCCGCCGCCGCCGCAGTCTTCCTCCTCCTCCTCCCGCGTCTTTAACCGCCACAACCCCCCTGCTTCCTCTTTCCGCTTCAACCCCCGAAACGCCGAAGACATCTACGCTGAGTTCTTCGGCCCGGACGAAGTCGGCTCCTCACGCCGCGACGCCTTCTTCCGGACCTCCAACGGTGTCCCCGGGTTCGGCGCCGCCGCCCCGAGGAAGGCAGCCGCGGTCGAGAATGCGCTGCCTTGCAGCTTGGAGGACCTCTACAAAGGCGTCAAGAAGAAAATGAAGATCTCCAGGAACGTCTACGACGCTTTTGGCAAATCACGATATGTGGAAGAGATTTTGACTATTGAGATAAAACCTGGCTGGAAGAAAGGAACAAAGATTACCTTCCCAGAGAAGGGTAACCAGGAGCCTGGTGTGGTCCCAGCAGATCTAACTTTTGTGATAGATGAGAAACCGCATGCTCTTTATAGAAGGGATGGCAATGATTTGGTGATCAACCAGGAGATAACCCTTCTTGAGGCCCTTACAGGTAAAACGTTGGACCTTACTACCTTGGATGGAAGGAGTCTGGTCTTACCATTGACAGATATTGTCAAACCTGGTGCCGAGGTTGTTGTCCCTGATGAAGGAATGCCTATATCAAAAGAGCCTGGGAAGAAGGGGAATCTGAGAGTTAAGCTTGACGTCAAGTATCCTTCAAGGCTAACTCCAGAGCAGAAGTCTGATCTGAGGAGAGTGTTAGGTGGAATCTCATGA 990 0.5263 MGMDYYNILKVNRNASDEDLKKAYKRLARIWHPDKNPVNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSSSRVFNRHNPPASSFRFNPRNAEDIYAEFFGPDEVGSSRRDAFFRTSNGVPGFGAAAPRKAAAVENALPCSLEDLYKGVKKKMKISRNVYDAFGKSRYVEEILTIEIKPGWKKGTKITFPEKGNQEPGVVPADLTFVIDEKPHALYRRDGNDLVINQEITLLEALTGKTLDLTTLDGRSLVLPLTDIVKPGAEVVVPDEGMPISKEPGKKGNLRVKLDVKYPSRLTPEQKSDLRRVLGGIS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01117 329 FunFam DnaJ subfamily B member 13 3 128 - -
Viun9g01117 329 SMART dnaj_3 3 62 IPR001623 -
Viun9g01117 329 Gene3D DnaJ domain 2 130 IPR036869 -
Viun9g01117 329 MobiDBLite consensus disorder prediction 79 104 - -
Viun9g01117 329 CDD DnaJ 4 59 IPR001623 -
Viun9g01117 329 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Viun9g01117 329 MobiDBLite consensus disorder prediction 76 105 - -
Viun9g01117 329 Gene3D - 231 311 - -
Viun9g01117 329 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Viun9g01117 329 Pfam DnaJ domain 4 67 IPR001623 -
Viun9g01117 329 Gene3D - 150 229 - -
Viun9g01117 329 SUPERFAMILY HSP40/DnaJ peptide-binding domain 155 231 IPR008971 GO:0006457|GO:0051082
Viun9g01117 329 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 325 - -
Viun9g01117 329 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 319 IPR008971 GO:0006457|GO:0051082
Viun9g01117 329 CDD DnaJ_C 156 313 - -
Viun9g01117 329 PRINTS DnaJ domain signature 24 39 IPR001623 -
Viun9g01117 329 PRINTS DnaJ domain signature 42 62 IPR001623 -
Viun9g01117 329 PRINTS DnaJ domain signature 62 81 IPR001623 -
Viun9g01117 329 PRINTS DnaJ domain signature 6 24 IPR001623 -
Viun9g01117 329 FunFam Dnaj homolog subfamily b member 148 229 - -
Viun9g01117 329 Pfam DnaJ C terminal domain 153 310 IPR002939 -
Viun9g01117 329 FunFam DNAJ heat shock family protein 230 325 - -
Viun9g01117 329 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01117 Viun-Chr9 9273480 9278754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01117 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 2.34e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01117 K09510 - gmx:100781572 553.132