Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01104 ATGGAGTTTCGCTCTCAAAGATCTGGTCACCAGGTCAAGGAAGAGAAGAGAACTGAATCAAGTCATGGAGATGAAGAACATCCTCGTGAACATGAGATTGTTATGCAGGCTACTCCCGAAAGATCCACCGTCGAGACTGGGCCAAATGGTTCTTGCATATCCAAAAAGGAAGAGGTTGATGAACTTGAAAATGCGAAAGCCGAAATGGGTGAAGTGATAGAAGAAAATCAAAGATTAAAGATGCGTTTGAACAGAATACTAAATGATTACCGAACACTGGAAATGCAATTCCACAGTATAGTTGAAGAAGAGAGAAAAGATTGTTCTGAGAAACAGAAGAATGATGAAGCGATGGAGGAATCAGAACTAGTTTGTCTGAGTCTGGGAAGAATTCCAAATCCAAGAAGCAACGAGAAAGGGAAAGTCCCTAAAAGATTGAAAGAGGAAGAAGATAAAGAAGGGTTGTCCCTTGGATTGGAGTGCAAGTTTGAGACATCAAAATCTGGAAGCACAATAAGTGAACGTGTGGGAAATGGAAGCCCTAGTAATAGTGTTGAAGAAGTGGGAAAAGAAGAAGGTGGTGGTGGAGAAAGCAAGGGACAGAAGACAAATAGAGATGAATTAATTGGTGAACAAAACCCTGCGAAGAAAACAAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTTTGAACGATGGATGTCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGCCCTCGAGCTTATTATCGTTGCACAGTTGCACCATCATGCCCAGTGAGGAAGCAGGTGCAAAGATGTGCTCAAGACATGTCCATATTAATCACGACCTACGAAGGAATCCACAACCACCCTCTTCCTCTTTCAGCAACAGCCATGGCTTCCACCACTTCCGCAGCTGCTTCCATGCTTTTATCTGGATCATCAACCTCACTCTCTGCATCAAGACCTTCCCCAACCATCACCACCACGGCTGCAGATCTTCACGGAATCAACTTTTCCCTCTCAGATTCTCCCCAACCAAACCAATACTACCTTTCCCATCCTTCACTCTCATCTTCACCTTCACACCCCACCATCACTCTCGACCTCACTTCCAATCCATCATCATCATCATCATCATCTTCACCTCCTTTTGTCAAATTCACTTCAAACTCAAACTACAACCCTCACAGGTACCCTCCTTCCACAAGCCTCAGCTTCACTTCCTCCCCATCCAATGCAACTTCTTGGACCAACGGCTTCTTCACCTACAACAGGAATGCCAATGCCAACATAAACCTCGGAAGACAACAACCGGAGCAACAACCGAATGACAACATCTACACTTCCTTCATGCAAAGAAACAACAATCCGATCCCTCCACCACAACATTCTCTGCCAGACACCATAGCTGCAGCAACAAAAGTAATCACAGCAGACCCTAATTTTCAGTCAGCTTTGGCAGCGGCACTTTCCTCGGTTATTGGCTCGGCAAACATTCAGGGAAACCAAGGTGCTGCAGAAAATCTGATTCAGAAAATAAAATGGGGTGAATTGTTTCCACCATCTTTTGCCTTACCTTCGTCTTCAAAAGTCAATGGGTGTGCTTCAAGCTTCTTGAACAAATCCCCAGCTAATTCACAACCTGGAAGTTTGATGTTTCTTCAACCACCTCTGCCACTTTCTAGCCCCAAAAGCGCTTCTGGGTCTCCCGGAGATCACCGAGACAAGAAAAATTAG 1737 0.445 MEFRSQRSGHQVKEEKRTESSHGDEEHPREHEIVMQATPERSTVETGPNGSCISKKEEVDELENAKAEMGEVIEENQRLKMRLNRILNDYRTLEMQFHSIVEEERKDCSEKQKNDEAMEESELVCLSLGRIPNPRSNEKGKVPKRLKEEEDKEGLSLGLECKFETSKSGSTISERVGNGSPSNSVEEVGKEEGGGGESKGQKTNRDELIGEQNPAKKTRVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILITTYEGIHNHPLPLSATAMASTTSAAASMLLSGSSTSLSASRPSPTITTTAADLHGINFSLSDSPQPNQYYLSHPSLSSSPSHPTITLDLTSNPSSSSSSSSPPFVKFTSNSNYNPHRYPPSTSLSFTSSPSNATSWTNGFFTYNRNANANINLGRQQPEQQPNDNIYTSFMQRNNNPIPPPQHSLPDTIAAATKVITADPNFQSALAAALSSVIGSANIQGNQGAAENLIQKIKWGELFPPSFALPSSSKVNGCASSFLNKSPANSQPGSLMFLQPPLPLSSPKSASGSPGDHRDKKN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01104 578 Coils Coil 55 96 - -
Viun9g01104 578 MobiDBLite consensus disorder prediction 349 384 - -
Viun9g01104 578 MobiDBLite consensus disorder prediction 166 185 - -
Viun9g01104 578 FunFam probable WRKY transcription factor 31 216 293 - -
Viun9g01104 578 Gene3D WRKY domain 216 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01104 578 ProSiteProfiles WRKY domain profile. 226 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01104 578 MobiDBLite consensus disorder prediction 137 153 - -
Viun9g01104 578 MobiDBLite consensus disorder prediction 166 205 - -
Viun9g01104 578 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 49 505 IPR044810 GO:0003700
Viun9g01104 578 SMART WRKY_cls 231 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01104 578 MobiDBLite consensus disorder prediction 545 578 - -
Viun9g01104 578 MobiDBLite consensus disorder prediction 1 58 - -
Viun9g01104 578 MobiDBLite consensus disorder prediction 1 36 - -
Viun9g01104 578 SUPERFAMILY WRKY DNA-binding domain 224 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01104 578 MobiDBLite consensus disorder prediction 190 205 - -
Viun9g01104 578 MobiDBLite consensus disorder prediction 130 153 - -
Viun9g01104 578 Pfam WRKY DNA -binding domain 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01104 Viun-Chr9 9040654 9047736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01104 7 495 WRKY Transcription Factor Family AT1G18860 39.640 4.16e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01104 WRKY 2.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01104 - - vun:114162352 1039.25