Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01101 ATGGAAAGTTCCAAGAACAACAGAGTGGAGAAAAGAGGGCACGAGCTAGTTGATGAGGATGACGATTCACAGCACCGTCTTACACATCCAAAGAAACCAAAACTACCCGGTTTAGCCAGTGTGATTGTGGAAGCATTAAAGGTGGACAGTCTGCAGAGACTATGCTCATCTTTGGAACCTCTTCTCAGAAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAATTGGGCCATGATAAATTGGCTGAAAGATCTCAGCCACCGAGATTAGAAGGACCAGTGCCGAAGAATCTGCAGCTTCAGTTCAGAACAAAAATGCCGCCTCATTTGTTCACTGGGGGAAAGGTTGAGGGAGAGCAAGGATCTGCAATCCATGTTGTGTTAATGGATCCCAACAGTGGCAGTGTGGTTCATGTTGGACCAGAATCTGTTGCGAAATTGAATGTGGTGGTACTTGAAGGTGACTTCAATGAGGAAGTGGATGATGATTGGACAAAAGAGCACTTTGAAGGGCATGAAGTAAAGGAGCGTGATGGGAAAAGGCCACTTCTAACTGGAGATTTGCAGGTTACTCTGAAGGAAGGGGTAGGAACCTTAGGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCCGGCTTGGTGTTAAGGTTGCTCCTGGTTATTGCGAGGAGATTCGTATTCGTGAGGGAAAGACTGAAGCCTTTGCAGTTAAAGATCACAGAGGAGAACTATACAAGAAACATTATCCACCTGCTTTGAATGATGAAGTTTGGAGATTGGATCGGATAGCTAAGGATGGGGCACTTCACAAAAAGTTGATTCAAGCAAAAATAGTAACTGTAGAAGATTTCCTACGACTTCTTGTCCGCGAGCCACAGAAGTTAAGAAGTATACTCGGTAGTGGAATGTCCAACAGAATGTGGGAGAGTACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGCAAGCTCTTTGTTTACTACACCGACGAAACCAATGCCGCTGGCATTGTATTCGACCATATATACCAGCTGAGAGGCCTCATTGCAGATGGCCAATTCTTCTCTTTGGAATCACTCACTCCAAATCAGAAGATGTCTGTGGATTCCCTGGTGAAGAAAGCATATGACAATTGGGAGCAAGTTGTAGAATATGATGGAAAAGTTTTAAATTCGCTCACTAATTCAAAAAAGGGATCAAGAGCTTTAGCCACTCAGATAATGAACCATAACAGTTTCCCAGAGCAGCAGTATTCCTCAGCAAAGAACAAGGTCTCATATGTCTCCTCTGAACCAAACCAACACTCGCAGATAACAAATAACTACTCAGCAAGTCCCGGTTTGGCAGACTATCTATTCGGGAGATCTGACAATCAGATGGTAGGCACATCTTTAACTGACTCTCAGATATCATTGAATGGCAGCATGAACTACATAACAGGTGAAAATCATGACAATGGTGGTGCTTATTTCGCTGGAGATTGGTCCCGACCAAGAAGTGGACAAGGGTTGGAAGACATTGTGGCAGAAGAACTCCGTCTGAGGAGTTCAGAGATGTTGGAGAGTGATGATATGCAGAGGTTACTTAAGACAATCAATGGTGGTCATTCTAATGAGGGTTGTTACACCTATAGCCTTCAGTATGAGCCTCAGATGTATCATTCATTCGGTGAGGATCAGGGAAAGCCTTCAGGGAAAGCTGTAGTGGGGTGGCTTAAGCTCAAAGCTGCTTTAAGGTGGGGCATTTTTATCAGAAAAAAAGCTGCAGAAAGGAGAGCACAACTCACTGAACTGAATTGA 1818 0.44 MESSKNNRVEKRGHELVDEDDDSQHRLTHPKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLGHDKLAERSQPPRLEGPVPKNLQLQFRTKMPPHLFTGGKVEGEQGSAIHVVLMDPNSGSVVHVGPESVAKLNVVVLEGDFNEEVDDDWTKEHFEGHEVKERDGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVAPGYCEEIRIREGKTEAFAVKDHRGELYKKHYPPALNDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRLLVREPQKLRSILGSGMSNRMWESTVEHAKTCVLGGKLFVYYTDETNAAGIVFDHIYQLRGLIADGQFFSLESLTPNQKMSVDSLVKKAYDNWEQVVEYDGKVLNSLTNSKKGSRALATQIMNHNSFPEQQYSSAKNKVSYVSSEPNQHSQITNNYSASPGLADYLFGRSDNQMVGTSLTDSQISLNGSMNYITGENHDNGGAYFAGDWSRPRSGQGLEDIVAEELRLRSSEMLESDDMQRLLKTINGGHSNEGCYTYSLQYEPQMYHSFGEDQGKPSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01101 605 MobiDBLite consensus disorder prediction 1 29 - -
Viun9g01101 605 PANTHER OS02G0177800 PROTEIN 10 531 IPR012416 GO:0005516
Viun9g01101 605 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Viun9g01101 605 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Viun9g01101 605 MobiDBLite consensus disorder prediction 1 35 - -
Viun9g01101 605 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01101 Viun-Chr9 9001329 9005170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01101 1 605 Calmodulin-binding Proteins AT2G24300 61.353 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01101 - - gmx:100775528 1095.49