Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01093 ATGAGTTTTGCCAAAACAACAAAAAGTACACAGAGCACAAGAAAAGAACCAGGGTCATCATTAATGTCAGAGCAGGAAACCGATTCATGGGGCTTCCTGTTTGTCTGTTTCTTGATCCTTTTCTCAGGTAAATTAGTTGTTGGGGATTCGTTGGCGACTGACGCAGAAGTTCTGCTGAAGCTGAAATCTTATTTGCTGAACCAAACTCGAACAAACAGAGGAGGGTACATAAACTGGAACAAGAACAGTTCAAATCCTTGTTATTGGTCAGGAATCGCTTGCAGCCTCCTGAACGGGACAACAACGAGGGTTGTGAAAGTGGATATCTCTTACAGTGAAATATATGGTAACATATTCGATGGGTTCTCTAATCTCACTGAGCTCAGACACCTTGACATGTCTTGGAACTCTCTCTCTGGGGGGATTCCTGAGGACTTGAGGATGAGCCAGAAGCTTGTGTATCTCAATCTCTCGCATAACACTCTCGAGGGGGAGTTGAATCTAAAGGGATTGACTCAGTTGCAAACCGTGGACTTGTCTGTTAATAGGTTCCGTGGGGAACTTGGGCTGAGTTTCCCTGCAATTTGTGACAGTTTGGTGACTTTAAATGTTTCAGAGAATCACTTGAGTGGTGGAATTCATGGATTCTTTGATCAATGCTTGAGTCTGCAGCACTTGGATTTGAGCACCAACCATCTAAATGGGACTTTGTGGACTGGATTTTCCAGGCTGAGAGAGTTTTCAATCTCAGAGAATTTTCTCACTGGGGTTGTTCCTCCACAGGCTTTTCCAGTGAACTGTAGCACCGAAAATTTGGACCTTTCAGTGAATTTATTTGTTGGTAAGGTCCCGAAGGAGGTGTCCAACTGCAAGAACTTAGTGGTTCTCAACCTTTCTAGTAACAATTTCACCGGAGATATTCCCCGTGAAATTGGTTCCATTTCTGGTCTTGAGGGATTGTTCTTGGCGAACAATACTTTCTCAAGGGATGTCCCAGAGACCCTTTTGACCTTGAACAATTTGTTCATCTTGGATTTGAGCAGAAACAAATTTGGTCGGGAAGTGCAGGAGATTTTTGGGAAATTCAAGCAAGTGAAGTTTCTTGTGCTGCACTCAAATTCCTACACTGGAGGGTTGAACTCATCAGGCATTTTTACATTGACAAACCTTAGACGTTTGGACTTGAGCTTCAATAATTTTTCTGGTCCATTACCTGTTGAAATCTCAGAAATGTCTTCACTCGCTTTCTTAACCTTAACCTACAACCAGTTCTCTGGATCTATTCCTCCTGAATTGGGAAAGTTGAATCGCCTTATGGCACTTGATCTTGCCTTCAACAGTTTCAGTGGAACGATCCCACCAAGCCTTGGAAACTTGACTACTCTGTTGTGGCTAACCCTTTCAGATAATTCATTAACCGGAGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGCTAAACCTTGCAAACAACAAACTATATGGAAAAATTCCTCCCGATCTTACAAGAATTGGAAGGAATGCAAGGGCCACATTTGAATCAAATGAAAAGAATCTTGGGGGTGTTGTTGCTGGCAATAGTGAGTGCTTAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCGTTCAGCTTTGTGTATACCATCCTGACAAGGAAGAATTGTAGGGCCCTTTGGGACAGGTTGCTCAAAGGATATGGTATCTTCCCCATGTGTACTTCTGAGCCCTCTGCTAGATCATCACACATAGCAGGGTATATTCAGCTAAGTGGGAACGATTTGAGTGGTGAGATTCCTTCAGAAATTGGAACCATGGTAAACTTTAGCATGTTGCATTTGGGAGATAACAAGTTCACTGGGAAATTCCCTATAGGGATGACAGGTTTACCACTCGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAAATTCCAAGTGAAATTGGCGACATGAAGTGTCTACAGGATCTTGATTTGTCTAGGAACAACTTCTCTGGAACATTTCCCATAAGTCTGGTACACTTGGATGAGCTTAGCAGGTTCAACATCTCGTACAATCCCCTCATATCTGGTACAGTCCCACCATCCGGACACTTACTCACTTTTGACAAGGATTCATATTTGGGTGACCCCTTCTTGAAACTCCCAAAGTTCTTTAACATCTCTGATGATAGAAATAGCACATTACAAAGAGTCTTGAAGAATCCCACAAAATGGTCTTTGGTTTTGGCTCTAGGATTAGCTATAGTGGTATTTGGACTTCTTTTCCTTGTAATATGCTTCTTGGTGAAAAGTCCATCTGTGGAACCAGGAAACCTGATGAAGAATATGAAGAATATAAAGAAAAAGAAAGCACATGATTCAGGCAGCTCCGGATCCTCACCGTGGTATTCTGACACAGTTAAGATATTCCACCTGAACAAGACAGTTTTCACACATGCAGACATCTTGAAAGCAACCTCAAACTTCACAGAGGAGAGAGTGATAGGAAGGGGTGGGTATGGAACAGTATATAGAGGGTCGTTTCCGGATGGGAGAGAGGTGGCAGTGAAGAAGCTCCAAAGGGAAGGAACTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTTCTAAGTGGTCATGGATTTAGCTGGCCTCATCCAAACCTTGTCACACTCTATGGTTGGTGCCTCTACGGTTCAGAGAAGATACTTGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAGCTTGTGACTGATACAAAACGGTTGAAATGGAAGAGGCGCCTAGAAGTGGCAATTGATGTGGCTAGAGCACTTGTCTATTTGCACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTTAAGGCCAGTAATGTGTTGCTAGATAAAAATGGGAAGGCCAAAGTCACAGACTTTGGACTTGCTAGGATTGTTGATGTTGGAGACAGTCATGTGAGCACAATAGTGGCTGGCACAGTGGGGTATGTTGCACCAGAATATGGACAAACATGGAAAGCCACTACAAAAGGGGATGTGTATAGCTTTGGGGTGCTGGTTATGGAGCTTGCAACTGGGAGAAGAGCAGTGGATGGAGGAGAAGAGTGTTTGGTGGAATGGACTAGGCGTGTTATGATGGATTGTGGAAGACAAGGGTTAGGTGAATCTGTGCAAGTTTTGTTGAAGGGAAGTGGGGTGGTTGAGGGTGCTAAGGAGATGGGTGAGTTGCTTCAAGTTGGGGTGAAATGCACACATGATGCACCACAGGCTAGGCCTAACATGAAGGAGGTTCTAGCCATGCTTATTAAGATATACGATCCTATTGGGGACTCAAATTATGGACACCTTGTGTAG 3351 0.4348 MSFAKTTKSTQSTRKEPGSSLMSEQETDSWGFLFVCFLILFSGKLVVGDSLATDAEVLLKLKSYLLNQTRTNRGGYINWNKNSSNPCYWSGIACSLLNGTTTRVVKVDISYSEIYGNIFDGFSNLTELRHLDMSWNSLSGGIPEDLRMSQKLVYLNLSHNTLEGELNLKGLTQLQTVDLSVNRFRGELGLSFPAICDSLVTLNVSENHLSGGIHGFFDQCLSLQHLDLSTNHLNGTLWTGFSRLREFSISENFLTGVVPPQAFPVNCSTENLDLSVNLFVGKVPKEVSNCKNLVVLNLSSNNFTGDIPREIGSISGLEGLFLANNTFSRDVPETLLTLNNLFILDLSRNKFGREVQEIFGKFKQVKFLVLHSNSYTGGLNSSGIFTLTNLRRLDLSFNNFSGPLPVEISEMSSLAFLTLTYNQFSGSIPPELGKLNRLMALDLAFNSFSGTIPPSLGNLTTLLWLTLSDNSLTGEIPPELGNCSSMLWLNLANNKLYGKIPPDLTRIGRNARATFESNEKNLGGVVAGNSECLAMKRWIPADYPPFSFVYTILTRKNCRALWDRLLKGYGIFPMCTSEPSARSSHIAGYIQLSGNDLSGEIPSEIGTMVNFSMLHLGDNKFTGKFPIGMTGLPLVVLNMTRNNFSGEIPSEIGDMKCLQDLDLSRNNFSGTFPISLVHLDELSRFNISYNPLISGTVPPSGHLLTFDKDSYLGDPFLKLPKFFNISDDRNSTLQRVLKNPTKWSLVLALGLAIVVFGLLFLVICFLVKSPSVEPGNLMKNMKNIKKKKAHDSGSSGSSPWYSDTVKIFHLNKTVFTHADILKATSNFTEERVIGRGGYGTVYRGSFPDGREVAVKKLQREGTEGEKEFRAEMKVLSGHGFSWPHPNLVTLYGWCLYGSEKILVYEYIGGGSLEELVTDTKRLKWKRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKNGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWKATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVMMDCGRQGLGESVQVLLKGSGVVEGAKEMGELLQVGVKCTHDAPQARPNMKEVLAMLIKIYDPIGDSNYGHLV 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01093 1116 CDD STKc_IRAK 833 1103 - -
Viun9g01093 1116 SUPERFAMILY Protein kinase-like (PK-like) 805 1101 IPR011009 -
Viun9g01093 1116 Gene3D Transferase(Phosphotransferase) domain 1 908 1110 - -
Viun9g01093 1116 Pfam Protein kinase domain 827 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01093 1116 ProSiteProfiles Protein kinase domain profile. 827 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01093 1116 Gene3D Ribonuclease Inhibitor 585 731 IPR032675 -
Viun9g01093 1116 Gene3D Ribonuclease Inhibitor 50 192 IPR032675 -
Viun9g01093 1116 ProSitePatterns Protein kinases ATP-binding region signature. 833 856 IPR017441 GO:0005524
Viun9g01093 1116 Gene3D Ribonuclease Inhibitor 193 267 IPR032675 -
Viun9g01093 1116 SUPERFAMILY L domain-like 259 514 - -
Viun9g01093 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 949 961 IPR008271 GO:0004672|GO:0006468
Viun9g01093 1116 Gene3D Ribonuclease Inhibitor 358 525 IPR032675 -
Viun9g01093 1116 Pfam Leucine Rich Repeat 128 146 IPR001611 GO:0005515
Viun9g01093 1116 Gene3D Ribonuclease Inhibitor 268 357 IPR032675 -
Viun9g01093 1116 FunFam Putative LRR receptor-like serine/threonine-protein kinase 362 524 - -
Viun9g01093 1116 SUPERFAMILY L domain-like 591 695 - -
Viun9g01093 1116 SMART serkin_6 827 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01093 1116 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 260 355 - -
Viun9g01093 1116 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 907 1107 - -
Viun9g01093 1116 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g01093 1116 Pfam Leucine rich repeat N-terminal domain 52 95 IPR013210 -
Viun9g01093 1116 SMART LRR_typ_2 387 411 IPR003591 -
Viun9g01093 1116 SMART LRR_typ_2 125 149 IPR003591 -
Viun9g01093 1116 SMART LRR_typ_2 459 483 IPR003591 -
Viun9g01093 1116 SMART LRR_typ_2 338 361 IPR003591 -
Viun9g01093 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 98 261 - -
Viun9g01093 1116 Gene3D Phosphorylase Kinase; domain 1 794 906 - -
Viun9g01093 1116 FunFam Leucine-rich repeat receptor protein kinase MSP1 789 906 - -
Viun9g01093 1116 SUPERFAMILY L domain-like 101 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01093 Viun-Chr9 8946368 8950402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01093 102 1100 Receptor kinase-like Gene Family AT1G55610 31.767 9.60e-142 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Viun9g01093 Pkinase 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01093 - - gmx:100781769 1877.83