Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun9g01087 | ATGGCTCTCTTCCGAAGGTTCTTTTACCGGAAACCACCCGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCCAAGAATGTGTTGGAGGAAGAGGAGTACAAGGTTTATATTGGGGGGGTTTTGGGTCAGCTACAGGATCACTATCCGGATGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGCAGTCGAATTTCAGACATAATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCCCTTTTGCCTCTGGAGATGATTCACCACTTCCTTCGGTCAAGTGAGAGCTGGTTGTCTTTGGAGGGCCAACAAAACGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCTGTGCTTGCGTTTATGCTAGCTGGTCTTCTGTTGTACAGGAAACAGTACAATGGGGAACACAAAACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTCTCCATCTCCTATCCCCTTTGAATCCACAACCCTCTCATTTGAGATATCTTCAGTACATTTCAAGGAGGCATTTGGGTTCTCAGTGGCCTCCTTCAGAAACACCCTTATATTTGGATTGCATTATTCTGAGGGTCCTTCCATTGCTTGACGGTGGAAAAGGATGCAGACCGGTTGTGCGTGTCTATGGTCCAGACCCTTCAAAACCTTCCAACCGAAGTTCTAAGCTTCTTTCCTCAACTTCAATGGGCCAAAATCATGTTCGTCACTACATGCAGGCAGAATGTATGCTCGTGAAAATTGACATCCGTTGTCATGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTGGTGAGGAGGTGATGTTCAGAGTCATGTTTCATACTGCGTTTGTACGGTCAAATATACTGACGCTGAGCCGCGATGAAATTGATATTCAGTGGGATGCAAAGGATCACTTCCCCAAGGACTTCAAATTTGAGGTGCTTTTTTTGGACGCTGATGCTGTTATGCCTAATCTAAACACAGTCGATGCGAGTGAAGATGCTAGTGACACAGAATGTGCTTCACCTGAGGCTGAGGAGTTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATGTACTGGAAGGTAAGGGAGATTATGATTTTCCAATGGTTCATGACAGTGGAGTGGATGATGGAAGTCATACAGAGATCTGGAAAGAGTATTCAGATCCTCATACTTTTCTGGATTCCATGTTAGATGATGGGATTCACCAACAGGTTGATGATACGAGGTACAAGCTTGACAAGAGGGTGGTTTTAGATACTCATGCTGTCAAAGATATTGGAGTGGATTATGGAGTAACTTTCATGACAAAGGAAGTCACTGTGAATGCTCTTGATAAGTTGGCAGTTAAGCAAAACAAATATGGCGAAGAGAACAACAAAACGGAAGAAGAGTTAGATTCAGAAGCAGGGCTGCAGGTGCTTGATATTTCCAGACCAAAATCTGATAAATTACTTATTTCTTCTCAAAAGAAACATCTTCCTTCAAACTCAAAGCCCATGCAAGAACCACATGGTTTTCAGGCACATTATGCAAAACCCAATGTAACAACTAGGTCGGTTCCTTCTAGTAAGGGTGCTTCTCAAGATTCCATGCATGTCTCATATCCACTATCAAGGAACAATAGTTCACCACTTAGATTGTCATATGTTACCTCTGAAAAGGAGGAAATTATTGCCAAAGGAAAATCTACTTCTAGTTCTCATGTCTCTGAAGCAATTGCTTTTACGGACACGATAAATGACCCGAAAAGCTGTCATGGTGATAACTCAAAATCTTCAAACATTGTACCTGAAATAGGCTCAAACTCTCCACTATTATCATTACTGTCAGTCAAAGAGACATCTCTTCAGTTAGCTAATCAAGCACCACAACAGAGCTATGGTCAAATGTTACAACTTCATCCACCTCCACCTCCTCCTCCACCTCCAGGTTTTGGGCAAAATACCCATTGGAAATCTGTTGGACAAAACAATGGAGCTTTACCTACTTCTCCTCATTCTCCTCCCATTGCAAATGGTGTAATTCCACCAAAAGTTTCACTACCACCACCACCACCTCCTCCCCCTCCTCCTCCTCCCCCTCCTTTGCAGTCTACAAATGAACCCTCCCTCCCTTCTCCCTCAATATCTCCAACAACGTTTAAAGCTCCACCTCCTGCACCCCGACCACCACATTATCCTCCACCTCCTTTAAGCAAATCTACACCACTTCCTCCTCCTCCTTTAAGTACTGCTCCACCACCGCCACCTCCTCCTCCTTCTTTATCCAGAGGTTCACCTCCCCCACCACCTCTTCCTCCATCAAGTGGAGCACCACCTCCACCATCATCTTCTTCACTGTCCAGAGCTCCACCTCCTCCACCTCCACCAAATCGTGGACCACCACCACCAACAATGCCTGGAGGCACAGCTCCTCCACCACCTCCAGGTGGTCGAGGACAACCTCCTACTGGAACACGAGCTCCTCTTGCTCATTCTCCTCATGTACCTCTTGGTGGTGCTACTTTTCCTTCAGCAATTGGAACTGATACAAGAGGGAAAGGTCGTGGACTTGGACGTCCTACAGGGTCTGGTGCCATGGGAACTCGGAAATCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGAGCATTGCAAGGAAGTTTATGGGATGAACTACAAAGACGTGGAGAGCTTCAAATAACACAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTCCGAAACCTGCTGATTCAGATGGTAAATCTGGTGGGCGGCGCAAATCTGTTGGATCCAAAGCTGACAAAATCCACTTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCTCTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGATTCAGTGTTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCAACCAAAGAGGAGATAGAGCTTTTAAAGGGATACACCGGTGATAAGGAGAATTTGGGGAAGTGTGAAAAGTATTTTTTAGAGCTGATGAAAGTGCCAAGAGTGGAGTCAAAACTTAGAGTATTCTCTTTCAAAATTCAGTTTGGGACTCAGATTACAGAGTTTAAGAAGAGTTTACAAACAGTCAACTCTGCTTGTGAAGAGGTCCGAAATTCATTCAAACTAAAGGAGATCATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTAGATAGTCTCTTAAAACTAACCGACACTCGTGCTTCAAATAGTAAAATGACACTAATGCATTTTCTTTGCAAGGTCCTAGCTGAAAGGTTTCCTGGACTCCTTGATTTTCACCTTGACCTTGTTAGCTTGGAAGCAGCCACTAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAAGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGAAAAGGATGGCCCAGTGACTGAAGTTTTTCGTAAGACATCGAAGGAATTCATTGCTGTTGCAGGGTCCGAGGTGGCATCTGTAACAAACCTGTATTCTGTGGTGGGAAGAAATGCAGATGCACTTGCCCTATATTTTGTTACTACAACTCTCTTGAATTTCACAAGGTTGTTTCTGAAGGCACATGAAGAGAATTGCAAACAAACAGTGTTAGAGAAAAAGAAAGCTGATAAAGAGGCTGAAATGGAGAAGGCTAAAGGCATTAACTTCATAAGGAAGAGTGGAAAAGATGAAGAAGAAGAAAGTTGA | 3870 | 0.4351 | MALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKVYIGGVLGQLQDHYPDASFMVFNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSQWPPSETPLYLDCIILRVLPLLDGGKGCRPVVRVYGPDPSKPSNRSSKLLSSTSMGQNHVRHYMQAECMLVKIDIRCHVQGDVVLECIHLSDDFVGEEVMFRVMFHTAFVRSNILTLSRDEIDIQWDAKDHFPKDFKFEVLFLDADAVMPNLNTVDASEDASDTECASPEAEEFYEAEEIFSNVIDVLEGKGDYDFPMVHDSGVDDGSHTEIWKEYSDPHTFLDSMLDDGIHQQVDDTRYKLDKRVVLDTHAVKDIGVDYGVTFMTKEVTVNALDKLAVKQNKYGEENNKTEEELDSEAGLQVLDISRPKSDKLLISSQKKHLPSNSKPMQEPHGFQAHYAKPNVTTRSVPSSKGASQDSMHVSYPLSRNNSSPLRLSYVTSEKEEIIAKGKSTSSSHVSEAIAFTDTINDPKSCHGDNSKSSNIVPEIGSNSPLLSLLSVKETSLQLANQAPQQSYGQMLQLHPPPPPPPPPGFGQNTHWKSVGQNNGALPTSPHSPPIANGVIPPKVSLPPPPPPPPPPPPPPLQSTNEPSLPSPSISPTTFKAPPPAPRPPHYPPPPLSKSTPLPPPPLSTAPPPPPPPPSLSRGSPPPPPLPPSSGAPPPPSSSSLSRAPPPPPPPNRGPPPPTMPGGTAPPPPPGGRGQPPTGTRAPLAHSPHVPLGGATFPSAIGTDTRGKGRGLGRPTGSGAMGTRKSSLKPLHWSKVTRALQGSLWDELQRRGELQITQEFDVSEIEKLFSANVPKPADSDGKSGGRRKSVGSKADKIHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEKYFLELMKVPRVESKLRVFSFKIQFGTQITEFKKSLQTVNSACEEVRNSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHFLCKVLAERFPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIRGLEKVKQELAASEKDGPVTEVFRKTSKEFIAVAGSEVASVTNLYSVVGRNADALALYFVTTTLLNFTRLFLKAHEENCKQTVLEKKKADKEAEMEKAKGINFIRKSGKDEEEES | 1289 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun9g01087 | 1289 | Gene3D | Formin, FH2 domain | 883 | 1256 | IPR042201 | - | |
| Viun9g01087 | 1289 | MobiDBLite | consensus disorder prediction | 656 | 670 | - | - | |
| Viun9g01087 | 1289 | MobiDBLite | consensus disorder prediction | 673 | 689 | - | - | |
| Viun9g01087 | 1289 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 336 | IPR035892 | - | |
| Viun9g01087 | 1289 | PANTHER | FORMIN-J | 1 | 732 | - | - | |
| Viun9g01087 | 1289 | Coils | Coil | 1246 | 1266 | - | - | |
| Viun9g01087 | 1289 | Pfam | Formin Homology 2 Domain | 886 | 1235 | IPR015425 | - | |
| Viun9g01087 | 1289 | Gene3D | Protein tyrosine phosphatase superfamily | 13 | 206 | IPR029021 | - | |
| Viun9g01087 | 1289 | MobiDBLite | consensus disorder prediction | 693 | 725 | - | - | |
| Viun9g01087 | 1289 | Coils | Coil | 1163 | 1190 | - | - |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun9g01087 | - | - | pvu:PHAVU_009G184800g | 1207.97 |
Showing 1 to 1 of 1 entries