Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01083 ATGAGGGGTGGGAGAAAGAGGAGTATGATAAAGCTTAAGTTTAGCAAGATCTACTCATTTGCTTGTGGTAAAACAACCTTGAAGAGAGAACATTCGCGGATTGGGGGCCATGGTCATTCCAGGGTGGTTTTCTGCAATGAACCTGATAGGTTCGAGGGAGGGGTTTTCAATTATGCTGATAATTCTGTTAGGTCCACAAAATACACGGTTGCCACTTTCTTGCCAAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTCTTGGTGGCTGGGATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATCCTTCCACTCTCTATCATCGTTGGGGCAACTATGGTGAAAGAGGGTATTGAAGACTGGCGCAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTGCATAAAGGTGATGGCAATTTTGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTATGAAGATGCAGTATGCTATGTTGAGACCATGAACTTGGATGGTGAAACAAATTTGAAGTTAAAACAAGGGTTGGATGTAACTTCTTCCTTACAGGAGGACTTCAAAATACGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATCTGTATTCATTTGTCGGGAGCATGGAGTTTGAAGAGCAAAAGTACCCTCTTTCTGCTCAGCAACTTCTTTTGAGAGACTCCAAACTTCGCAACACAGACTATGTGTTTGGAGTCGTCGTCTTTACTGGTCATGACACAAAGGTTATTCAAAACTCCACTGATCCTCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTTGGATCTATTATCTTTGGCATCATAACCAAAGGAGACCTGAACAATGGGTTGATGAAAAGATGGTATCTAAGACCAGATCGTTCCACAATTTTCTTTGATCCAGAGAGAGCAGCTGCAGCTGCCATATTTCATTCTTTAACAGCCTTAATGTTATATAACTTCTTTATTCCTATCTCTCTTTATTTCTCAATAGAGATTGTCAAAGTCCTTCAAAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCAGACAAACCAGCTCGTGCCCGAACTTCAAACTTGAATGAGGAACTAGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGCGTTCATCAAATGTTCTATTGCTGGGGTACCTTATGGTCATGGTGTTACAGAGGTTGAGCAAGCCATGGGAAGAAGTAATGGTTCACCTATTCTTCATGAGCACATTAATGGTCTAAAATCAAAATCTAATGAAATTGGGGACTCTCCTGATAGAAAAGAGCCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTTATGCAGATATTATACAATTTTTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGAATTGTTTGTCAACGTATGAGTTGGATCCTGTTTCTGGCCATCAAGTTGAAAGGACATACAAGCTTCTCAATGTTTTAGAGTTTAGTAGTTCAAGGAAGCGAATGTCAGTGATAGCGAAAGATGAAGAAGGGAGAATTTTACTACTCTCTAAAGGTGCTGACAGTGTAATGTTTGAAAGGCTTGCCAACAATGGGAGGAAGTTTGAAGAGAAAACAATGGAACATGTGCATGAATACGCTGATGCAGGTCTAAGGACCCTAATACTTGCTTATCGCGAACTTGATGAAGAAGAATACAAGGTGTTTGATGGTAAATTGTCTGAAGTAAAAAATTCAGTTTCGGAAGACCGCGAAACACTGATCGAAGAATTATTGGATACAGTTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGTATCGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGGTTTTGACTGGAGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAAATTATAATTCATTTGGAGATTCCAGAAATTCAAGCATTAGAAAAGGTTGGAGACAAGATGGCTATTGCGAAGGTATCAAGGGAAAGTGTGCATCATCAGCTATATGAAGGTGCTCAACTGCTTTTTGCATCCAAAGGGACCTGCCAGCAGACATTTGCACTGATCATTGATGGAAAATCACTTACTTATGCTTTAGAGGATAATATGAAAAACATGTTTCTAGAGCTTGCAAGTCATTGTGCATCTGTTATTTGCTGCCGCTCGTCGCCAAAGCAGAAGGCTCTGGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACAACATTGGCTATTGGTGATGGAGCTAATGATGTCGGAATGCTTCAAGAAGCAGACGTAGGGATTGGAATCAGTGGTGTCGAAGGAATGCAGGCCGTCATGTCTAGTGATATTGCAATTGCACAGTTCCAGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTTTTCTTTAAGAATATCACATTTGGATTCACCCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGAGAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAGTGTCTTCTTTTCGTCACTTCCTGTAATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGCCTGAAGTTTCCCATCTTATACCAAGAAGGGGTGCAAAATGTTCTCTTCAGCTGGCGTATAGTACTTAGTTGGATGCTTAATGGATTTATTAATGCTACAATGATATTCTTCTTCTGCACCAAAGCAATTGAGCCTCAGGCCTTTGATGAGGAGGGAAGAACAGCCGGAAGAGACATGCTGGGTGTGACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAGATGGCACTTGCTATACGTTACTTCACCTTGATACAACATGTTTTTATCTGGGGTTCCATCGCTTTCTGGTATCTTTTCCTCCTGGCATATGGAGCAATGCCTCCAAAATTTTCTACAAATGTTTATCAAGTCTTCATTGAAACTCTCGCAGCATCTCCTTCCTTTTGGGCTGTGACATTCTTTGTGGCGATCTCAACACTTATACCATACCTTACCTTCTCAGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGGTACAATGGATAAGGTACGAGAGGAAGACAAATGGCACTGAATAA 3507 0.4029 MRGGRKRSMIKLKFSKIYSFACGKTTLKREHSRIGGHGHSRVVFCNEPDRFEGGVFNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIVGATMVKEGIEDWRRKKQDIEVNNRRVILHKGDGNFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKIRDFRAVIKCEDPNANLYSFVGSMEFEEQKYPLSAQQLLLRDSKLRNTDYVFGVVVFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSIIFGIITKGDLNNGLMKRWYLRPDRSTIFFDPERAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMAFIKCSIAGVPYGHGVTEVEQAMGRSNGSPILHEHINGLKSKSNEIGDSPDRKEPIKGFNFTDERIMNGNWVNEPYADIIQFFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAAREVGFKFYKRTQNCLSTYELDPVSGHQVERTYKLLNVLEFSSSRKRMSVIAKDEEGRILLLSKGADSVMFERLANNGRKFEEKTMEHVHEYADAGLRTLILAYRELDEEEYKVFDGKLSEVKNSVSEDRETLIEELLDTVERNLILLGATAVEDKLQNGVPDCIDKLAQAKIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKVGDKMAIAKVSRESVHHQLYEGAQLLFASKGTCQQTFALIIDGKSLTYALEDNMKNMFLELASHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADVGIGISGVEGMQAVMSSDIAIAQFQYLERLLLVHGHWCYRRMSSMICYFFFKNITFGFTLFLYEVYASFSGEPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNVLFSWRIVLSWMLNGFINATMIFFFCTKAIEPQAFDEEGRTAGRDMLGVTMYTCVVWVVNLQMALAIRYFTLIQHVFIWGSIAFWYLFLLAYGAMPPKFSTNVYQVFIETLAASPSFWAVTFFVAISTLIPYLTFSVIQMWFFPMYHQMVQWIRYERKTNGTE 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01083 1168 NCBIfam phospholipid-translocating P-type ATPase 58 1156 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun9g01083 1168 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Viun9g01083 1168 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Viun9g01083 1168 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Viun9g01083 1168 CDD P-type_ATPase_APLT_Dnf-like 60 1031 - -
Viun9g01083 1168 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Viun9g01083 1168 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1149 IPR023298 -
Viun9g01083 1168 Pfam Cation transport ATPase (P-type) 538 631 - -
Viun9g01083 1168 SFLD p-type atpase 411 922 IPR044492 -
Viun9g01083 1168 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1149 IPR032630 -
Viun9g01083 1168 Gene3D - 705 911 IPR023214 -
Viun9g01083 1168 SUPERFAMILY HAD-like 422 926 IPR036412 -
Viun9g01083 1168 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Viun9g01083 1168 NCBIfam HAD-IC family P-type ATPase 843 953 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g01083 1168 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1160 - -
Viun9g01083 1168 FunFam Phospholipid-transporting ATPase 119 289 - -
Viun9g01083 1168 Gene3D - 119 289 - -
Viun9g01083 1168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 708 IPR023299 GO:0000166
Viun9g01083 1168 Gene3D - 547 704 IPR023299 GO:0000166
Viun9g01083 1168 SFLD C1.7: P-type atpase like 411 922 - -
Viun9g01083 1168 FunFam Phospholipid-transporting ATPase 706 911 - -
Viun9g01083 1168 FunFam Phospholipid-transporting ATPase 548 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01083 Viun-Chr9 8806230 8822310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01083 3 1168 Primary Pumps ATPases AT1G68710 70.259 0.0 1779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01083 K01530 - gmx:100798329 2138.61