Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01082 ATGAGGGGTGGGAGAAAGAGGAGTATGATAAAGCTTAAGTTTAGCAAGATCTACTCATTTGCTTGTGGTAAAACAACCTTGAAGAGAGAACATTCGCGGATTGGGGGCCATGGTCATTCCAGGGTGGTTTTCTGCAATGAACCTGATAGGTTCGAGGGAGGGGTTTTCAATTATGCTGATAATTCTGTTAGGTCCACAAAATACACGGTTGCCACTTTCTTGCCAAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTCTTGGTGGCTGGGATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATCCTTCCACTCTCTATCATCGTTGGGGCAACTATGGTGAAAGAGGGTATTGAAGACTGGCGCAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTGCATAAAGGTGATGGCAATTTTGAATATACTGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTATGAAGATGCAGTATGCTATGTTGAGACCATGAACTTGGATGGTGAAACAAATTTGAAGTTAAAACAAGGGTTGGATGTAACTTCTTCCTTACAGGAGGACTTCAAAATACGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATCTGTATTCATTTGTCGGGAGCATGGAGTTTGAAGAGCAAAAGTACCCTCTTTCTGCTCAGCAACTTCTTTTGAGAGACTCCAAACTTCGCAACACAGACTATGTGTTTGGAGTCGTCGTCTTTACTGGTCATGACACAAAGGTTATTCAAAACTCCACTGATCCTCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTTGGATCTATTATCTTTGGCATCATAACCAAAGGAGACCTGAACAATGGGTTGATGAAAAGATGGTATCTAAGACCAGATCGTTCCACAATTTTCTTTGATCCAGAGAGAGCAGCTGCAGCTGCCATATTTCATTCTTTAACAGCCTTAATGTTATATAACTTCTTTATTCCTATCTCTCTTTATTTCTCAATAGAGATTGTCAAAGTCCTTCAAAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCAGACAAACCAGCTCGTGCCCGAACTTCAAACTTGAATGAGGAACTAGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGCGTTCATCAAATGTTCTATTGCTGGGGTACCTTATGGTCATGGTGTTACAGAGGTTGAGCAAGCCATGGGAAGAAGTAATGGTTCACCTATTCTTCATGAGCACATTAATGGTCTAAAATCAAAATCTAATGAAATTGGGGACTCTCCTGATAGAAAAGAGCCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTTATGCAGATATTATACAATTTTTTTTTCGCTTATTGGCAATTTGTCATACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGAATTGTTTGTCAACGTATGAGTTGGATCCTGTTTCTGGCCATCAAGTTGAAAGTCGGGGGAAAATGCATTCGGGAGAAGCTGGAGTTGGTACATCTTGGAAAACACCAAAGCCAAGTGCATTTGGAAATCTGGGGGCCGTGTGTCCGGTAAAAGCTAAGGGCCATGCATCTGATAAAAGTGGCAAAGGTCTCGAAGGAAAAGGCAAATGGACATACAAGCTTCTCAATGTTTTAGAGTTTAGTAGTTCAAGGAAGCGAATGTCAGTGATAGCGAAAGATGAAGAAGGGAGAATTTTACTACTCTCTAAAGGTGCTGACAGTGTAATGTTTGAAAGGCTTGCCAACAATGGGAGGAAGTTTGAAGAGAAAACAATGGAACATGTGCATGAATACGCTGATGCAGGTCTAAGGACCCTAATACTTGCTTATCGCGAACTTGATGAAGAAGAATACAAGGTGTTTGATGGTAAATTGTCTGAAGTAAAAAATTCAGTTTCGGAAGACCGCGAAACACTGATCGAAGAATTATTGGATACAGTTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGTATCGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGGTTTTGACTGGAGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAAATTATAATTCATTTGGAGATTCCAGAAATTCAAGCATTAGAAAAGGTTGGAGACAAGATGGCTATTGCGAAGGTATCAAGGGAAAGTGTGCATCATCAGCTATATGAAGGTGCTCAACTGCTTTTTGCATCCAAAGGGACCTGCCAGCAGACATTTGCACTGATCATTGATGGAAAATCACTTACTTATGCTTTAGAGGATAATATGAAAAACATGTTTCTAGAGCTTGCAAGTCATTGTGCATCTGTTATTTGCTGCCGCTCGTCGCCAAAGCAGAAGGCTCTGGTTACTAGACTGGTCAAATCTGGAACTGGTAAAACAACATTGGCTATTGGTGATGGAGCTAATGATGTCGGAATGCTTCAAGAAGCAGACGTAGGGATTGGAATCAGTGGTGTCGAAGGAATGCAGGCCGTCATGTCTAGTGATATTGCAATTGCACAGTTCCAGTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGGAGGATGTCATCAATGATATGCTATTTTTTCTTTAAGAATATCACATTTGGATTCACCCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGAGAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAGTGTCTTCTTTTCGTCACTTCCTGTAATTGCCCTTGGGGTCCTTGACCAGGATGTATCTGCCAGGTACTGCCTGAAGTTTCCCATCTTATACCAAGAAGGGGTGCAAAATGTTCTCTTCAGCTGGCGTATAGTACTTAGTTGGATGCTTAATGGATTTATTAATGCTACAATGATATTCTTCTTCTGCACCAAAGCAATTGAGCCTCAGGCCTTTGATGAGGAGGGAAGAACAGCCGGAAGAGACATGCTGGGTGTGACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAGATGGCACTTGCTATACGTTACTTCACCTTGATACAACATGTTTTTATCTGGGGTTCCATCGCTTTCTGGTATCTTTTCCTCCTGGCATATGGAGCAATGCCTCCAAAATTTTCTACAAATGTTTATCAAGTCTTCATTGAAACTCTCGCAGCATCTCCTTCCTTTTGGGCTGTGACATTCTTTGTGGCGATCTCAACACTTATACCATACCTTACCTTCTCAGTAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGGTACAATGGATAAGGTACGAGAGGAAGACAAATGGCACTGAATAA 3663 0.4065 MRGGRKRSMIKLKFSKIYSFACGKTTLKREHSRIGGHGHSRVVFCNEPDRFEGGVFNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIVGATMVKEGIEDWRRKKQDIEVNNRRVILHKGDGNFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKIRDFRAVIKCEDPNANLYSFVGSMEFEEQKYPLSAQQLLLRDSKLRNTDYVFGVVVFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSIIFGIITKGDLNNGLMKRWYLRPDRSTIFFDPERAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMAFIKCSIAGVPYGHGVTEVEQAMGRSNGSPILHEHINGLKSKSNEIGDSPDRKEPIKGFNFTDERIMNGNWVNEPYADIIQFFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAAREVGFKFYKRTQNCLSTYELDPVSGHQVESRGKMHSGEAGVGTSWKTPKPSAFGNLGAVCPVKAKGHASDKSGKGLEGKGKWTYKLLNVLEFSSSRKRMSVIAKDEEGRILLLSKGADSVMFERLANNGRKFEEKTMEHVHEYADAGLRTLILAYRELDEEEYKVFDGKLSEVKNSVSEDRETLIEELLDTVERNLILLGATAVEDKLQNGVPDCIDKLAQAKIKIWVLTGDKMETAINIGFSCRLLRQGMKQIIIHLEIPEIQALEKVGDKMAIAKVSRESVHHQLYEGAQLLFASKGTCQQTFALIIDGKSLTYALEDNMKNMFLELASHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADVGIGISGVEGMQAVMSSDIAIAQFQYLERLLLVHGHWCYRRMSSMICYFFFKNITFGFTLFLYEVYASFSGEPAYNDWFLSLYSVFFSSLPVIALGVLDQDVSARYCLKFPILYQEGVQNVLFSWRIVLSWMLNGFINATMIFFFCTKAIEPQAFDEEGRTAGRDMLGVTMYTCVVWVVNLQMALAIRYFTLIQHVFIWGSIAFWYLFLLAYGAMPPKFSTNVYQVFIETLAASPSFWAVTFFVAISTLIPYLTFSVIQMWFFPMYHQMVQWIRYERKTNGTE 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01082 1220 Gene3D - 757 963 IPR023214 -
Viun9g01082 1220 SUPERFAMILY HAD-like 422 978 IPR036412 -
Viun9g01082 1220 Pfam Cation transport ATPase (P-type) 539 683 - -
Viun9g01082 1220 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1212 - -
Viun9g01082 1220 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Viun9g01082 1220 FunFam Phospholipid-transporting ATPase 119 289 - -
Viun9g01082 1220 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Viun9g01082 1220 SFLD p-type atpase 411 974 IPR044492 -
Viun9g01082 1220 SFLD C1.7: P-type atpase like 411 974 - -
Viun9g01082 1220 Gene3D - 626 756 IPR023299 GO:0000166
Viun9g01082 1220 NCBIfam HAD-IC family P-type ATPase 895 1005 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun9g01082 1220 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Viun9g01082 1220 NCBIfam phospholipid-translocating P-type ATPase 58 575 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun9g01082 1220 NCBIfam phospholipid-translocating P-type ATPase 641 1208 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun9g01082 1220 FunFam Phospholipid-transporting ATPase 758 963 - -
Viun9g01082 1220 CDD P-type_ATPase_APLT_Dnf-like 60 1083 - -
Viun9g01082 1220 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Viun9g01082 1220 PRINTS P-type cation-transporting ATPase superfamily signature 923 942 - -
Viun9g01082 1220 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1201 IPR023298 -
Viun9g01082 1220 Gene3D - 119 289 - -
Viun9g01082 1220 Pfam Phospholipid-translocating P-type ATPase C-terminal 951 1201 IPR032630 -
Viun9g01082 1220 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 760 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01082 Viun-Chr9 8806230 8822311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01082 3 1220 Primary Pumps ATPases AT1G68710 67.254 0.0 1746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01082 K01530 - gmx:100785037 1893.63