Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01077 ATGGAGTCTGGTGAGGAGATTAATTTGAATATAGAAAGTGGTGGTGGAAATAATGGGAAGAGTGGTGATGGGTTCATTGATAGGAGTAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAAGAATTCTCAAGAGGTTTTCACGCTTCTTTTGAGGTGTTCTTATCAAGTGACTTTAGTAAAGTCGCCGAGACAGGTAATTGACGCGCTGAATGCAGAGGGGCAACATATAGATATCATACTGGCTGAACTTGACCTTCCAACAAAGAAGGGCATGAAGATGTTGAAGTACATAGCACGGGATAAAGAGTTTCGCAGAATCCCAGTTATAATGATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAATGCTTGAGACTTGGAGCAGCTGACTATCTAGTAAAGCCCTTACGTACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGACGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAGTTATGAGTTTGATCTTGTAGCATCAGACCCCAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCAACAATCCAGAGGTGGGATTGTCAGTCCAACAAGAGCAAGAGTCTACTATTGCAATTGCGGCTGCTGCCGAGAAACCTCTAGATGCTCATGCATCAGAACACGGGCCTGAAGTCAATGGATTTAATGATCATCGAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGTGAGTCATCAGCCTTTTTCACGTATGTCAAAGCATCTATACTGAAGAGCAACTTTGAAGGGGTTGTTAACGTAGACAACAATGGTGCTGCACATGTGAGGATGGAAGTTATGCATCAAGCATGTGGTCAACAAGGGGTTAATGACCTTCAAACACGTGAAAATGGAGAGACCTGTGAAAGTCAATCGCAAGATGACTTACCCAGCAGCAGTAGTATACCTGATTCTCTCTCTATGGAAAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCCCCGCAAAAGCACAAGGAAGAAAATTTCCATCAGGGTGTGATGCATCCAAGAAATGGAACTCATTGTTCTGAGCATGAAGTGTCTGGCATGGCTTCCCAACATACTTATCCATATTATATTTCAGGAGTTGTTAATCATGTCATGATGCCTTCATCTGCACAAATGTATCACCAGAAGAATATGCAGGACCTACAGAATCATCCTAGTGCAGCTATGATTGCCCAGTACAGTCATCTTCCCCAAGGTGGTCCTCACGGACCAGGGATGACATCTTTCCCATACTACCCAATGAGTATATGCTTACAACCTGGTCAGGTTCCTCAACCCCATTCATGGCCATCATTTGGCAGCTCAAGTTCATCAGAAGCAAAATTAAGTAAAGTTGACAGGAGAGAAGCAGCACTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGACTCGCCGAAAGACGGCCTCGGGTGAGGGGACAGTTTGTCAGAAAATTAAACAATTCCAATGTTGATCTCAATGGACAGCCTGCATCAATTGACTATGATGAAGACGATGAAGAGGATGAAGATGAGCAGGGAGCTAGAGATTCTTCTCCTGAGGATGCTTGA 1683 0.4355 MESGEEINLNIESGGGNNGKSGDGFIDRSKVRILLCDNDSKNSQEVFTLLLRCSYQVTLVKSPRQVIDALNAEGQHIDIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYEFDLVASDPSDANTNSTTLFSDDTDDKSKRSNNPEVGLSVQQEQESTIAIAAAAEKPLDAHASEHGPEVNGFNDHRTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNVDNNGAAHVRMEVMHQACGQQGVNDLQTRENGETCESQSQDDLPSSSSIPDSLSMERSCTPPASMEVSPQKHKEENFHQGVMHPRNGTHCSEHEVSGMASQHTYPYYISGVVNHVMMPSSAQMYHQKNMQDLQNHPSAAMIAQYSHLPQGGPHGPGMTSFPYYPMSICLQPGQVPQPHSWPSFGSSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNNSNVDLNGQPASIDYDEDDEEDEDEQGARDSSPEDA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01077 560 MobiDBLite consensus disorder prediction 455 476 - -
Viun9g01077 560 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Viun9g01077 560 MobiDBLite consensus disorder prediction 179 208 - -
Viun9g01077 560 MobiDBLite consensus disorder prediction 310 355 - -
Viun9g01077 560 SUPERFAMILY CheY-like 27 156 IPR011006 -
Viun9g01077 560 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Viun9g01077 560 MobiDBLite consensus disorder prediction 536 560 - -
Viun9g01077 560 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 314 IPR045279 GO:0009736
Viun9g01077 560 SMART REC_2 31 146 IPR001789 GO:0000160
Viun9g01077 560 Pfam CCT motif 480 522 IPR010402 GO:0005515
Viun9g01077 560 ProSiteProfiles CCT domain profile. 480 522 IPR010402 GO:0005515
Viun9g01077 560 Gene3D - 31 236 - -
Viun9g01077 560 MobiDBLite consensus disorder prediction 310 346 - -
Viun9g01077 560 MobiDBLite consensus disorder prediction 455 472 - -
Viun9g01077 560 MobiDBLite consensus disorder prediction 520 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01077 Viun-Chr9 8726779 8732281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01077 20 559 Response Regulator Gene Family AT5G61380 50.874 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Viun9g01077 Response_reg 7.3e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01077 K12127 - gmx:100799728 966.066