Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01060 ATGTTAGCATCTTTATGCAGAGGTAATGCCATTGGCAGTGATGGGTTTCATTGGCCCTATGAATTTCCTCTGCAAGATAGCTATTTTGATGTTGTCCCATTCATGAAGTGTTATTATCCCCATGACATTTTATACGAAACTATGCCGCTTGAACCAACCCCACTAAGTTTTCAAGACTACGACTTCAGTGATGTTAAAAACGTGCTTTCTGCATGGAACGAAGTTGACGGTTCGGATCATAGACCTGCGTTTTCATCAAGCAACGATGGTGGAAGTGTGAATGAGATGAGGGATGAAGTGAAGGGTAAACAACGCAGAGAAGAGAGAATTAGTAGCAGTGCGAGAATGCTATCGAGGAAAACCGTTTCTCAGTACTTCTACATGCCTATATCACAGGCTGCGAAAGAGCTTAACGTTGGTCTCACACACTTGAAGAAAAGGTGCAGGGAATTAGGTATTCAAAGGTGGCCACATAGGAAGCTAATGAGTCTTCAAACCCTAATAAAGAACATGCAAGAGCAAGGAGAGGCTGAAGGACCTGAAAATGATGAAAAAATAAGGATTGCTATTGAAATGTTGGAGAAAGAAAAGAGCATGGTGGAAGAAAGACCAGATTTGGAACTTGAAGATAAAACAAGAAGGCTTAGACAAGCTTGTTTCAAGGCTAACTACAAGAAGAGGAAACTCATGAGCATGAGGTTCATGGAACACAATCTTCCCTTGGTGCCCTATCCCACAAGTATTGACAAAAGGGGTGAATAA 762 0.416 MLASLCRGNAIGSDGFHWPYEFPLQDSYFDVVPFMKCYYPHDILYETMPLEPTPLSFQDYDFSDVKNVLSAWNEVDGSDHRPAFSSSNDGGSVNEMRDEVKGKQRREERISSSARMLSRKTVSQYFYMPISQAAKELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNMQEQGEAEGPENDEKIRIAIEMLEKEKSMVEERPDLELEDKTRRLRQACFKANYKKRKLMSMRFMEHNLPLVPYPTSIDKRGE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01060 253 MobiDBLite consensus disorder prediction 80 106 - -
Viun9g01060 253 Pfam RWP-RK domain 117 164 IPR003035 -
Viun9g01060 253 ProSiteProfiles RWP-RK domain profile. 100 185 IPR003035 -
Viun9g01060 253 PANTHER PROTEIN RKD4 49 231 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01060 Viun-Chr9 8422763 8423729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01060 22 232 AtRKD Transcription Factor Family AT1G18790 44.601 1.51e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Viun9g01060 RWP-RK 3.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01060 - - gmx:100782238 375.555