Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01039 ATGGTGTCTGAGACTTCAGCCACTGTTATTGAAAAGGTCAACAATTCACAAGATTTATCAAGAAAAAGGTCTTGTTCCAATAAACAGAAACAAGAAAAAATCCCTAAGAGAATTCGCAAGGCTGAAAGAGAGAAAGAGAAGCGTGGACAGTTGAATGAACTCTTTCTTGGTCTTGCTGATACACTCGATCTTAAAGAACAGAACAATGGAAAAGCTTCTATCTTGAGGGAATCCATCAGATTGCTGAAAGAGTTGTTCAGTCAGATCGAGTCCTTGAAAAAGGACAGTGCATCTCTGTTGTCAGAGACTCACTATGTGACTATGGAGAAAAATGAGATGGAGGAGGAGAATTGTGTTCTGAAAACTGAAATTGAGAAACTTGCCGGTGAAATAAAAGCAAGAGTAGCCCAATGTGGAGCTAACCTGATGAATCCATTTCCACAACCAGAAAAGATTGCAGAGTTTTCAGGGGAGAATCTGCAATTGTCGAGCACAGAAGCTGCAGTAGTGCAGCAAGGACATGCAGTTTTGGTTGTCCCCATGACTGCTCATCATGGTCCTCATAATGTTGGTGACCAGACACCAAAACCAACCTCGACTATCACAAAACCACATCCTAGGTATCCTACTCCAACGGATTCATGGCCACTGCAGTTGCTTTCAGAGCAACCAACTTCAAATTAG 684 0.4196 MVSETSATVIEKVNNSQDLSRKRSCSNKQKQEKIPKRIRKAEREKEKRGQLNELFLGLADTLDLKEQNNGKASILRESIRLLKELFSQIESLKKDSASLLSETHYVTMEKNEMEEENCVLKTEIEKLAGEIKARVAQCGANLMNPFPQPEKIAEFSGENLQLSSTEAAVVQQGHAVLVVPMTAHHGPHNVGDQTPKPTSTITKPHPRYPTPTDSWPLQLLSEQPTSN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01039 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 35 99 IPR036638 GO:0046983
Viun9g01039 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 85 IPR011598 GO:0046983
Viun9g01039 227 Gene3D - 31 109 IPR036638 GO:0046983
Viun9g01039 227 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g01039 227 MobiDBLite consensus disorder prediction 192 207 - -
Viun9g01039 227 MobiDBLite consensus disorder prediction 1 45 - -
Viun9g01039 227 PANTHER TRANSCRIPTION FACTOR BHLH47 1 226 - -
Viun9g01039 227 MobiDBLite consensus disorder prediction 184 227 - -
Viun9g01039 227 Coils Coil 75 102 - -
Viun9g01039 227 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01039 Viun-Chr9 8133054 8134745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01039 1 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 41.870 1.03e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01039 - - gmx:100782436 213.772