Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01016 ATGTGTGATGTTCGACAGAGAAAATCCAGAAGCATGGCAAACGAACCTGCGAGCTTCTGGACTCAGGCAAACGCTCTCCTTAGAAAGAATTTAACGTTTCAGAAGCGAAATGTTAAAACGAACGTTCGACTCATCATGTTCCCGTTCCTGTTGTGTCTGTTGCTGCTTCTGCTTCAACGCCTGGTGGATTCTCAATTGGACAAGGCAGAGAACAAGTGTGGGTGCGCTTGTGTGAGGAGAGTGGGGGACACGTGTGTGGAGGAGGAGTGCGGGATTGAGCATTCGGATTTGGACCAAGTAACAACCTGCGCCATTCCCAATCCTCCGGAATGGCCTCCTCTGTTGCAAGTGCCGGCTCCGCAGTACCGAGCTGTCAGAACGGACAATTTTCCCTTTTCCGATTATCCAAACGCCTCCTGCAGGAGGAATGGTTCCTGCCCTGTCACTATGCTCTTCACCGGGACAAATCAGTCTTTTGGAGAAATTATATCTGGGAATATGATCCCAACTTCCTTCACTGCTATAAACAGCTCTTCTGTTATGAGTAGTTTGGCAGCGAATGTGGCTGGATCAGCCTCAAATACAGAGAACACCAATTTTCTGGAACCTGCTTTCTTTTCGGATCAACCTATTTATTATCTTCAAAGTCAGTGCACGCAGAACTCTACATTTTCCATTTCTTTTGAGCTATCCGCAGCAATTAGCAGAGAACAAGAGTTAGTATGCGCTGAGGGCTTGCGTTTATGGCGTAATAGTGCTACTGAAGTGAACAATGAGCTATATAGAGGCTACCGGAGAAGTAACCTAGAGGAACAAATCGAAGAGATAGCTGCAGGTTATGATTTTTTGAATTCAAATGGAAGAGTGTTTAATGTCAGCATATGGTACAACTCCACCTACAAAAACGACACTGGTTCTACTGAAATTGCATTGGCGCGTATTCCTCGTTCTGTTAATTTGGTATCAGATGCCTACCTGCAGTTTCTGTTGGGACCTGGTACCAAAATGTTTTTTGAGTTTGTAAAGGAAATGCCAAAGCCTTCAACCCCAATTAATTTTGATTTGGCTTCTCTTTTGGGTGGTCTGTTCTTCACATGGGTCATCCTGCAACTTTTCCCTATTGCCTTGACATCGCTTGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCGTACGGTTATTTTCTTGCCTTATCAATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCACTCATAGGGTTGAATTTCTTCACAATGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTGCACTGGCTTTTTTATTGGCTTCCGTGTTTTCAAATGTTAAAACTGCTACAGTAATTGCGTATATAGGTGTGTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACATCATTTCCAAGAGGGTGGATCATTGTTATGGAGCTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTTCGCAATATTCCTTTAATGGTGACGCTTTGGGGACTGATGGTATGCGCTGGAGTAATCTGAGCGATAGCGCAAATGGCATGAAGGAGGTCTTAATTATAATGTTTGTGGAGTGGCTTCTGGTGCTTTCCTTTGCCTATTATATCGATCAAGTTTTGTCAACAGGAAGCAGAAAAAGTCCTCTTTTTTTCTTGAAAGGATTTCAGAAAAAGCCTCATTCATCTTTTCGGAAGCCTAGTATCCAAAGGCAGAAATCCAAAGTTTTCGTTCAGATGGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCGACCATCAATCAAGCAATTGTATGCGACGACCTGAGAAAGGTCTACCCGGGGAGAGATGGTAACCCTGAGAAACATGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGAGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAACATGATTTGCTGTGGGAATCTCTGACAGGAAGAGAGCATCTACTGTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTGACAGAAGCAGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTTATGGAGGAGTTGCAGATAAGAAAGCTGGAAAATACAGCGGAGGAATGAAAAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAAGGTTGTGTATATGGATGAGCCAAGTACTGGTTTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTCAAGCGTGCAAAACAAGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAGGCCGAAGTCCTATGCGATCGATTAGGAATATTTGTAGATGGAAGCTTGCAGTGCATAGGAAACCCAAAGGAGTTGAAAGGTAGGTATGGAGGAACCTACGTGTTCACAATGACAACATCTGTGGATGATGAAAAGGATGTAGAGAATTTGGTGCGAAGGCTGTCCCCAAATGCTAACAAGATCTACCATATCTCTGGAACACAAAAGTTTGAGCTACCAAAGGAGGAGGTTAAAATAGCAAATGTATTCAAAGCAGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCATGGGGTCTAGCTGATACCACATTGGAAGATGTCTTCATCAAAGTTGCACGTGGGGCTCAGGCATTTGACACCTTGTCATAG 2874 0.4269 MCDVRQRKSRSMANEPASFWTQANALLRKNLTFQKRNVKTNVRLIMFPFLLCLLLLLLQRLVDSQLDKAENKCGCACVRRVGDTCVEEECGIEHSDLDQVTTCAIPNPPEWPPLLQVPAPQYRAVRTDNFPFSDYPNASCRRNGSCPVTMLFTGTNQSFGEIISGNMIPTSFTAINSSSVMSSLAANVAGSASNTENTNFLEPAFFSDQPIYYLQSQCTQNSTFSISFELSAAISREQELVCAEGLRLWRNSATEVNNELYRGYRRSNLEEQIEEIAAGYDFLNSNGRVFNVSIWYNSTYKNDTGSTEIALARIPRSVNLVSDAYLQFLLGPGTKMFFEFVKEMPKPSTPINFDLASLLGGLFFTWVILQLFPIALTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLALSIVYMLCFVIFGSLIGLNFFTMNDYSIQFVFYFIYINLQIALAFLLASVFSNVKTATVIAYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYSFNGDALGTDGMRWSNLSDSANGMKEVLIIMFVEWLLVLSFAYYIDQVLSTGSRKSPLFFLKGFQKKPHSSFRKPSIQRQKSKVFVQMEKPDVTQEREKVEQLLLEPTINQAIVCDDLRKVYPGRDGNPEKHAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTEAVEESLKSVNLFYGGVADKKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKGRYGGTYVFTMTTSVDDEKDVENLVRRLSPNANKIYHISGTQKFELPKEEVKIANVFKAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01016 957 Coils Coil 266 286 - -
Viun9g01016 957 ProSitePatterns ABC transporters family signature. 774 788 IPR017871 GO:0005524|GO:0016887
Viun9g01016 957 CDD ABC_subfamily_A 639 860 - -
Viun9g01016 957 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 602 951 IPR026082 GO:0016020|GO:0055085|GO:0140359
Viun9g01016 957 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 635 872 IPR003439 GO:0005524
Viun9g01016 957 FunFam ABC transporter A family member 7 624 900 - -
Viun9g01016 957 Pfam ABC transporter 657 801 IPR003439 GO:0005524
Viun9g01016 957 Gene3D - 627 895 IPR027417 -
Viun9g01016 957 SMART AAA_5 665 848 IPR003593 GO:0016887
Viun9g01016 957 Pfam ABC-2 family transporter protein 274 565 IPR013525 GO:0016020|GO:0140359
Viun9g01016 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 873 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01016 Viun-Chr9 7924357 7933182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01016 644 864 Calmodulin-binding Proteins AT2G36910 22.747 5.47e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01016 - - gmx:100805474 1723.37