Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01015 ATGAGGACCACCCTCACCGGTTTGCCATTGGTGTTGCAGCAATTCAGAGCTCTGTTGAAGAAGAATCTGTTACTGTCATGGCGGAACAAGAGAGCGAGTCTTCTGCAATTGCTTTCCCCTCTCATATTCATTTTCCTCATATTCGCCATCGACAAGGCGATCAAGGCTCAGACATCGACCTCCTCCGCCTACAAGACCGTCACCGACCCTCCCACCCAACCGTCGCCGCCCATAACTCCCTGCGAAGACAAGTTCTTCATCAAACTCCCGTGCTACGACTTCGTTTGGAGCGGTGACCAAAATCCCAACTTCCAAACCATCGTCACCCGCATCATGAACAACAACCCCGGCAGACCCATCCCTCCCTCCAAGGTGAAGTCGTTCAAGGACAAGACCGAAGTGGATGCGTGGCTGTTCAGTAACCCTATGAGTTGTCCCGGAGCGCTTCATTTCTCGCAGCTAAACGACACCGTTATAAGCTACGGTCTTCAGACCAACTCCACCAGTCTTCAGTGGCGAGGCAAATATCAGGACCCCACTATGTCGTTTCAACTTCCTCTTCAGCTTGCCGCCGAGAGGGAAATTGCCAGACACCTTATTGGAGACCCGAGTTTCAGTTGGAATGTGTTTCTGAGGGAATTCGCGCACCCTTCCATGACTCCTTTCTCTGCCGTGGGTACAATTGGTCCCGCGTTTTTCCTCGCCATTGCTATGTTTAATTTTGTTCTTCAGATAAGCTCTTTGGTGACGGAGAAAGAGCTTAAACTTCGCCAGTCAATGACAATGATGGGCCTTTACGACTTTGCTTACTGGTCGTCCTGGCTGATTTGGGAGACGGTTGTCACAATCCTATCGTCCCTCCTGATAGTACTCTTTGGAATGATGTTCCAGTTCAGTTTTTTCTTGAAAAACAGTTTCGCGGTCCTGTTTATCTTCTTCTTCCTATTTGAACTTAATATGACTGGCTTGGCCTTCATGTTGTCTGCTTTCATTAAGAAGTCATCTTCGGCAACAACAATGGGATTCTCTATATTTATTGTGGGCTTTTTGACTCAGCTTGTGGTACAAGCAGGATTTCCTTACACGAATAGTTTCTCCAAAACTTTACGAAATTTGTGGTCGTTATTCCCACCCAATCCTTTTTCTCAAGGTATACAAGTGCTTTCAGAAGCAGTTGATACTTCCGAAGACAATGGTGTTAGCTGGAGTAGACGAGGAGAATGCCCTCATACCGATTCAGACTGTGTGTTAACTATTGATGATATTTATAAATGGCTTGCGGCTACATTCGTTCTCTGGTTTGTTCTGGCCATTTATTTTGACAATATAATCCCAAATGCATCGGGTGTGAGGAAGTCAATATTCTACTTTCTAAATCCCAATTATTGGATGGGAAGAGGGGGTCAGAAAGTGAAAGAGGGTGGGCTTTGTAGTTGTGTAGGTTCAAACCCACGTCAGGAAATAAGTACACCTGATGATGAAGATGTGCTTGATGAAGAAAGCAAAGTGAAACAGCAACTAGCTGAAGGTCTGGTTGATGCAAATATTGCTGTTCAAATACATGGCCTTGCGAAGACCTATGCCGGTACGCGTAACATTGGTTGCTGCTGCAAATGTACAAAGACTGCTCCATACACTGCTGTTAAGGGTTTGTGGGTAAACTTTGCAAAAGATCAGTTGTTTTGTCTTCTAGGACCCAATGGAGCTGGAAAAACCACAGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTAGCGGAGATGCGTTGATTTATGGACATTCAATCAGAAGTTCTATTGGCATGTCAAACATTCGAAAGCTTATAGGAGTATGTCCACAGTTTGATATACTATGGGATGCACTGTCTGGCCAAGAACACCTCCAACTCTTTGCTACTATTAAAGGCCTGTCCCCAGCTTCCATAAAATCAATTATCCAGGCTTCATTATCAGAGGTGAAACTCACGGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAGCGCCGTCTCAGTGTTGCAATTGCGCTTATTGGTGACCCTAAGTTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGAAGGCACGTGTGGGACATAATTGAAAACGCAAAAAGAGGGCGTGCCATTGTTCTTACGACTCACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCAAAAGGAAGGCTTCGATGCATTGGCACCTCAATCAGATTGAAATCACGCTTTGGTACTGGTTTTATTGCAAACATCAGCTTCCATGGAAACAATATTGAACGCAGTCCAACCAATGGTGATGCAATATCTACAGAGCATCGTGAGGAAGTGAAGAAATTCTTTAAGAATTATTTAAATGTAGAGCCAAAAGAGGAGACCAATAACTTTATAACTTTTGTGATTCCCCATGACAGAGAGGCGCTCCTAACAAATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATTTCTGACATCCAGCTTGGTCTTACAACTCTCGAAGAAGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAACGCTACAGCTGAAGGGAGGCTAACAACCCTGACCTTAACATCTGGGGAATCTGTGCAGATTCCCATAGGAGCTAGGTTTGTGGGAATTCCAGGAACAGAGACTGAGGAAAACCCAACAGGGTTTATGGTAGAAGTTTACTGGGAGCAAGATGATACTGGGACCCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTAGTCCTCATGGCCTTCAATTACCATCCTCACCTTCTGCAAGAAACCGTAGATATTTAAACCGGCCAGGACCAATTAATGGAATTGTGATTGATCCAAGTCAAGTTAATCCAGGTGATTTTCAGCGATAA 2907 0.4462 MRTTLTGLPLVLQQFRALLKKNLLLSWRNKRASLLQLLSPLIFIFLIFAIDKAIKAQTSTSSAYKTVTDPPTQPSPPITPCEDKFFIKLPCYDFVWSGDQNPNFQTIVTRIMNNNPGRPIPPSKVKSFKDKTEVDAWLFSNPMSCPGALHFSQLNDTVISYGLQTNSTSLQWRGKYQDPTMSFQLPLQLAAEREIARHLIGDPSFSWNVFLREFAHPSMTPFSAVGTIGPAFFLAIAMFNFVLQISSLVTEKELKLRQSMTMMGLYDFAYWSSWLIWETVVTILSSLLIVLFGMMFQFSFFLKNSFAVLFIFFFLFELNMTGLAFMLSAFIKKSSSATTMGFSIFIVGFLTQLVVQAGFPYTNSFSKTLRNLWSLFPPNPFSQGIQVLSEAVDTSEDNGVSWSRRGECPHTDSDCVLTIDDIYKWLAATFVLWFVLAIYFDNIIPNASGVRKSIFYFLNPNYWMGRGGQKVKEGGLCSCVGSNPRQEISTPDDEDVLDEESKVKQQLAEGLVDANIAVQIHGLAKTYAGTRNIGCCCKCTKTAPYTAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTSGDALIYGHSIRSSIGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLSPASIKSIIQASLSEVKLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFHGNNIERSPTNGDAISTEHREEVKKFFKNYLNVEPKEETNNFITFVIPHDREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIARQAELENATAEGRLTTLTLTSGESVQIPIGARFVGIPGTETEENPTGFMVEVYWEQDDTGTLCIAGHSQKVPSPHGLQLPSSPSARNRRYLNRPGPINGIVIDPSQVNPGDFQR 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01015 968 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 493 859 IPR026082 GO:0016020|GO:0055085|GO:0140359
Viun9g01015 968 Pfam ABC-2 family transporter protein 33 439 IPR013525 GO:0016020|GO:0140359
Viun9g01015 968 SMART AAA_5 557 741 IPR003593 GO:0016887
Viun9g01015 968 Pfam ABC transporter 551 693 IPR003439 GO:0005524
Viun9g01015 968 FunFam ABC transporter A family member 2 508 772 - -
Viun9g01015 968 Gene3D - 512 770 IPR027417 -
Viun9g01015 968 MobiDBLite consensus disorder prediction 947 968 - -
Viun9g01015 968 ProSitePatterns ABC transporters family signature. 666 680 IPR017871 GO:0005524|GO:0016887
Viun9g01015 968 CDD ABC_subfamily_A 518 752 - -
Viun9g01015 968 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 764 IPR003439 GO:0005524
Viun9g01015 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 545 746 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01015 Viun-Chr9 7905919 7912319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01015 561 763 Calmodulin-binding Proteins AT2G36910 24.883 3.13e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01015 - - gmx:100786538 1673.29