Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01013 ATGGGAAAATCACCAGGAAAATGGATCAAAACTGTACTATTTGGGAAAAAGTCATCCAGATCAAATATGTCAAAGGGAAGAGAGATTGTTAATAAAAGAGAAGCAGTGGTTACTTCCAACGTGTTGGAGAACGGTTTGGCCTTAGATCCAAACCACATCGAGATTGCTGCAAATGAGGAGGTCCTTGAACTGGAGAATGAAGAATCAGAAGTTATTTTACCTGAGAATCAAGAAAGAGACAGTATAGGACCTGTTGATCCAGATGCACCGCCTGATCCAGAGAAAATCAGGCAGGAGGTAGCAGCAATAAAGGCACAAGCTGCTTTCAGGGGTTACTTGGCTCGCAGGGCATTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTAGTTAGGAGGCAAGCAGTTGTTACATTATGCTGTATGTATGGGATTGTAAAGTTTCAAGCACTTGCCCGTGGACTAAAGATTAGGAAGTCTAATGTTGGATTTGAAATCCATCAGAAGCGCAGTCTGTTTAAGCCTCTGGAGGGCAAACTTGGTGAGCCAGTTGGTATTTCCACAAAAATTTCAAAGTTGTCTGCAAATACTTTCATCCGTAAGCTTCTTGCTTCATCAATTACAATAATGGCCCTGCGCTTGCAATATGTTAGTGGAGATCCAAATTCAGTGTTAAGCTGGTTGGAGCGCTGGTCATTATCTTACTTCTGGAAACCAGTTTCCCAACCTAAGAAGATTCGAGACTCCAAATCTCAGAGAAAGCAGGGTAATATTTCAAATGGAGAAGTTCAAATTTCCAAGTCAAGACGCACTAACCGGAAGCTTCCTGTTGCAAGTTTTGAACCAGTCCCAGTGCAAACAAATCCTGAAATTGAGAAACCTAAACGTAATTTCAGGAAAACACCATACCAGGTGTCAGATCCAGAGCAAGACAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGATTCATAACCCTGTTGTTGAGAATGCTGTTCAGCCAGAAGTTGAGTCTGAAACTCTAAAGCAGCATTTGGAAATCACAACAGTCATTCCAGGTAATGTTGGTTCAGAACAAGTGATCATTACTTCTGAGGAAAAGATCAAGAAGGAAGAAATTTTGACTATCTCCGATGTGCCTGATATCGAAGTTACTCCAAGACCATTGGTTAACAAGGAAGTGTCGGAGATTCCAAGTAATTATCAAATGTCTGTAGAATCTGAACCCTTGACAGAGACCACAACTAAAGATAGAAATACTTCTCGTGATGAAGTTCAAAATGGGCTAGGCGATCTACCAGAGGCTATTTTTAAAGAAGACAACTCCCTATTAACAAATGGAGATTTGAGTCATAAAGATCTGACAGGTAATGAAAACCAGAAACCTACCCGTAAAGCATCAAATTTGACAAAACAGGAAGATGGGGAAGATGGCTTAAAGAATAGTCCAAAAGTACCAAGTTATATGGCAGCAACTGAATCCGCCAAGGCAAAGTTGAGGGCACTAGGGTCCCCAAGGACTGGAGAAGATGTAATTGAGAAAAACAACAACACTGCTGGTTCTGGGAGACATTCTCTGCCATCTTCAACTGGCAACAAGATTAGTTCGCAATCACCTAGGACACAGAGATCAGTTCCAGCAGGTGGCAAAGGGACTAAAAAAAGTGACAGATCAATGGCATCTTCTAAAGGAGGGAATGGTAAAGTAATTCAAGCAGAGTGGAGGAGGTGA 1758 0.4152 MGKSPGKWIKTVLFGKKSSRSNMSKGREIVNKREAVVTSNVLENGLALDPNHIEIAANEEVLELENEESEVILPENQERDSIGPVDPDAPPDPEKIRQEVAAIKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKFQALARGLKIRKSNVGFEIHQKRSLFKPLEGKLGEPVGISTKISKLSANTFIRKLLASSITIMALRLQYVSGDPNSVLSWLERWSLSYFWKPVSQPKKIRDSKSQRKQGNISNGEVQISKSRRTNRKLPVASFEPVPVQTNPEIEKPKRNFRKTPYQVSDPEQDNPQSELEKVKRNLRKIHNPVVENAVQPEVESETLKQHLEITTVIPGNVGSEQVIITSEEKIKKEEILTISDVPDIEVTPRPLVNKEVSEIPSNYQMSVESEPLTETTTKDRNTSRDEVQNGLGDLPEAIFKEDNSLLTNGDLSHKDLTGNENQKPTRKASNLTKQEDGEDGLKNSPKVPSYMAATESAKAKLRALGSPRTGEDVIEKNNNTAGSGRHSLPSSTGNKISSQSPRTQRSVPAGGKGTKKSDRSMASSKGGNGKVIQAEWRR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01013 585 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Viun9g01013 585 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Viun9g01013 585 PANTHER IQ-DOMAIN 5-RELATED 1 544 - -
Viun9g01013 585 SMART iq_5 97 119 IPR000048 GO:0005515
Viun9g01013 585 SMART iq_5 120 141 IPR000048 GO:0005515
Viun9g01013 585 MobiDBLite consensus disorder prediction 258 278 - -
Viun9g01013 585 MobiDBLite consensus disorder prediction 456 585 - -
Viun9g01013 585 MobiDBLite consensus disorder prediction 251 321 - -
Viun9g01013 585 MobiDBLite consensus disorder prediction 519 554 - -
Viun9g01013 585 Gene3D - 96 144 - -
Viun9g01013 585 Pfam Protein of unknown function (DUF4005) 482 564 IPR025064 -
Viun9g01013 585 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
Viun9g01013 585 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Viun9g01013 585 MobiDBLite consensus disorder prediction 409 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01013 Viun-Chr9 7894738 7902157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01013 1 585 IQD Protein Family AT1G74690 42.652 2.03e-117 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01013 - - gmx:100786022 905.975