Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00957 ATGGCTGTGGAAAATCAAAGGGGTCATTTGGGGGATGAAGATGGGAGTGGTGACCGTTTTCCAGTGGGTATGCGTGTTCTGGCCGTGGACGACAACCCAATTTGTCTCAAAGTGTTGGAGACTCTGCTTCGCAAATGCCAGTATCAGGTTACTACAACTAATCACGCAGTTGAGGCTCTGAAAATGTTGAGGGAAAACAGAAACAAGTTTGACCTTGTAATCAGCGATGTGAATATGCCTGACATGGATGGATTTAAGCTCCTTGAGTTGGTGGGACTTGAAATGGACCTCCCTGTCATCATGTTGTCAGCACACAGTGATACAAAGCTGGTGATGCAGGGTGTTACTCATGGTGCTTGTGACTATTTACTGAAACCTGTTCGAATTGAAGAGCTGAAGAACATATGGCAGCATGTGGTCCGAAGAAAGAATTTTGATGGCAAGGATCAGAGCAAGGCTTCCAATGATGAAAAGGCTCTGAATATTGCTGGGGAAGGTAGCCCAAGCCTGAGATCAGAAAACAGTGCTGACCAGAATAAAAGGCTTGGTAAGAAAAGGAAGGACCAGAGTGAGGAAGAAGAAGATGATGGGGAAGGGAATGGAGATGATGATGACCCCTCAGCGCAGAAGAAACCTCGTGTTGTTTGGTCTGTTGAGCTGCATAGAAAATTTGTTGCTGCTGTTAATCAACTTGGCCTAGAAAAGGCTGTTCCCAAGAAAATACTTGACCTGATGAATGTTGAAGGTCTTACAAGGGAAAATGTGGCAAGCCATCTACAGAAGTATAGACTGTATCTGAAAAAGGCAAACCATCAAGCTAACATGGTTGCTGCATTGGGTGGTAGTGATTCTTACCTACGAATGGGTTCAATCGATGGATTTGGAGATTTTTGCACCGCTTCTGGTTCTGGAAGGATCTCAAACACTACATTACCATCATATGCATCTTCTGGAATTTTCAGTAGGCTGAATTCCCCAGCTGGATTGAACATGCGAGGAATCAGTTCTTCTGCGCTTATCCGTCCCGTTCAGACTCAAAACCTCAACAGCTCCTTAAACACACTTGGAAACATTCAGCCATCAATTTTTTCCGCAAATCAGAGCTCAGGTTTGTTACAGGGCATTCCAACATCAATTGAGCTTAACCAATCTAAGCAAAGCAACTGTTCAACCGGTTTATCGCAGCTAAGTCAAGTTGATTCAAGTGGATTTACAGTTGCCTCTAGCTTCCCAGACAGTAGGGCTACTACAGTTAATGGTCCAAACAATTCACTACCATGTGCCTCAAATAATCATATAATCTTACAAGGAAATCCACAGCAAACACATGGCCCAGGAACATTTAGAAACCAGTCTTCTGTTAGAGCAGAACCTTTTGGCATAGGTGGTTCTTCTAATATGTTGGATTATAATCGGTGCAACGAAAACTGGCAGAATGCGGCACAGTTGTCCAAATTTCCGGCCAATTCCTTGCCGTTGTGTGATGCTTTCGGCAATGACCAACTGCCTCCAACCAGCATCAATGTTTCCAACTCAGGTACTCATATTGGCAACACTCCGGTTGATTTTTCTTCCAGAATGGCAATGACTGTTCCTTTGGAAGAAGTACAGCCTTTAAGCTACACACCACAACAAAGGTGGGAAGAACATAAATTGGATTATGACCAAAACTTGAGTCGACCCTTCAATCCTGTAAATTCATATGCTTCTTCCAGTGCAGCAACAAGTTCTATGGGGCATGGCTTAAATCAAAATAATGCAATTTGTAGCAATAGAATTAATGCATCTTTGGTTTGTCCATGCACTGAAGTTGATAGATTCTCTTCTGACATTCCACTGAAGTCGAATGAAGCCTACATTTTGGAGCAATTAAAGTCCCAAGAAGGATTTATGCAGAATACTTTTGGTACCTTGGATGACATTATGGGTGCTATGGTCAAAAGGGAACAAAATGAGTTAACGTTGTTGGATGGAGAAATTGGATTTGATGCCTCGTACCCTGTTGGATCATGCAACTGA 2019 0.4299 MAVENQRGHLGDEDGSGDRFPVGMRVLAVDDNPICLKVLETLLRKCQYQVTTTNHAVEALKMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMQGVTHGACDYLLKPVRIEELKNIWQHVVRRKNFDGKDQSKASNDEKALNIAGEGSPSLRSENSADQNKRLGKKRKDQSEEEEDDGEGNGDDDDPSAQKKPRVVWSVELHRKFVAAVNQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKKANHQANMVAALGGSDSYLRMGSIDGFGDFCTASGSGRISNTTLPSYASSGIFSRLNSPAGLNMRGISSSALIRPVQTQNLNSSLNTLGNIQPSIFSANQSSGLLQGIPTSIELNQSKQSNCSTGLSQLSQVDSSGFTVASSFPDSRATTVNGPNNSLPCASNNHIILQGNPQQTHGPGTFRNQSSVRAEPFGIGGSSNMLDYNRCNENWQNAAQLSKFPANSLPLCDAFGNDQLPPTSINVSNSGTHIGNTPVDFSSRMAMTVPLEEVQPLSYTPQQRWEEHKLDYDQNLSRPFNPVNSYASSSAATSSMGHGLNQNNAICSNRINASLVCPCTEVDRFSSDIPLKSNEAYILEQLKSQEGFMQNTFGTLDDIMGAMVKREQNELTLLDGEIGFDASYPVGSCN 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00957 672 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Viun9g00957 672 PIRSF RR_ARR_type-B 1 672 IPR017053 GO:0003677|GO:0003700|GO:0009736
Viun9g00957 672 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Viun9g00957 672 SMART REC_2 24 136 IPR001789 GO:0000160
Viun9g00957 672 Gene3D - 207 269 - -
Viun9g00957 672 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Viun9g00957 672 SUPERFAMILY CheY-like 23 145 IPR011006 -
Viun9g00957 672 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Viun9g00957 672 FunFam Two-component response regulator 207 270 - -
Viun9g00957 672 CDD REC_typeB_ARR-like 26 140 - -
Viun9g00957 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 382 IPR045279 GO:0009736
Viun9g00957 672 Gene3D - 23 160 - -
Viun9g00957 672 MobiDBLite consensus disorder prediction 147 210 - -
Viun9g00957 672 MobiDBLite consensus disorder prediction 177 192 - -
Viun9g00957 672 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Viun9g00957 672 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00957 Viun-Chr9 7317405 7322029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00957 18 671 Response Regulator Gene Family AT2G25180 42.185 7.96e-133 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Viun9g00957 Response_reg 1.2e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00957 K14491 - gmx:100776075 1107.43