Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00937 ATGCCAGATTTAGGGAACCTCGTTCTCTCTTCCACTCTCACACTCTCTCACTGCTCCTCCGATGTTGATGTTGCCGCGGCCGCCGACGCTCCCGCCAAAACCCTACCCAATGCCTTCGCTTCGGGGCCTGCTTTCGAGCCTCGGGTTTTGAAGCGCACCCGCGGCTCAGTGGATCGGGTCAAGAAGTCCGCTTCCGACAAAGCTTTTCAGGATCGCCTCAAAGATCCCTTCTCTTATCCTTTTCTGGTTGGAGCTCCCAAATTGCGGGAGTGTTGTTTTTGCCGCCATTTTATCTACCCTGGGGAGGAGCTGTTGTGTTCGGTTCGCGGATGCGACGCGCGGTGCCATTCTGAATGTGCAAAAGATTCTGTCGGAGCTACCGGTCTGAAAAAGTACAAGTGTCCACAGCATGTATGCTTCATTTGCAAGCAAAAGAAGCACTTGAGGTGTGTACGTTGTAAAATTGCATTCCATAGTAAATGTGCGCCGTGGCCAGATGCAGTGTTGCCACTAAAAGATCATCCTGGGCTAGCTGTTTGCTGGAGGCATCCTTCTGATTGGCGCTTGGATAGGAAGCCTGATACTTCAACAAGTGACATTTCGGAAGTATTCTGTCGCTTGCCTCTTCCGTATATCAGTGAGGAGTTTAAGATTGATTCCTCCTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCACCATATGTACACATAAGACGCAATGTATACTTAGTAAAGAAGAAACGTAGTAATGTGGATGATGGTGCAGGGTGCACCAGCTGCAGCTCTACATGTTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGTTGCTCAAAAGCTTGTCGCTGCTCTGAAAATTGCAACAATCGTCCATTTCGCAAGGAGAAAAAGATCAAGATAGTCAAGACTGAACATTGTGGATGGGGAGTGGAGGCCGCTGAAACCATTGATAAAGGTGGATTTATAGTTGAGTATATTGGAGAAGTCATTGACGATGCTTTATGTGAGAAGAGGCTCTGGGACATGAAATACATGGGTGTACAAAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATTGATGCAACTTTCAAAGGAAATACTTCACGCTTTCTGAACCATAGCTGTGATCCCAACTGTGTTTTGGAAAAATGGCAAGTAGATGGTGAGACACGTGTGGGTGTTTTTGCTGCTCGTTCAATACAATCTGGAGAGCCATTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTTAAATGCAACTGTGGTGCAGCAAATTGTCAAGGCTTTCTAGGGACGAAAAAGAAAATTGGCAAGCTAGATTTGTGTTGGGGTTCTAAACGCAAGCGAACATCAAATGCTTGCATTACGCTGGTAACAACTGTATAA 1401 0.4604 MPDLGNLVLSSTLTLSHCSSDVDVAAAADAPAKTLPNAFASGPAFEPRVLKRTRGSVDRVKKSASDKAFQDRLKDPFSYPFLVGAPKLRECCFCRHFIYPGEELLCSVRGCDARCHSECAKDSVGATGLKKYKCPQHVCFICKQKKHLRCVRCKIAFHSKCAPWPDAVLPLKDHPGLAVCWRHPSDWRLDRKPDTSTSDISEVFCRLPLPYISEEFKIDSSWKDMDSKMEQPPPYVHIRRNVYLVKKKRSNVDDGAGCTSCSSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKEKKIKIVKTEHCGWGVEAAETIDKGGFIVEYIGEVIDDALCEKRLWDMKYMGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIQSGEPLTYDYRFVQFGPEVKCNCGAANCQGFLGTKKKIGKLDLCWGSKRKRTSNACITLVTTV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00937 466 Gene3D SET domain 208 451 IPR046341 -
Viun9g00937 466 ProSiteProfiles AWS domain profile. 254 297 IPR006560 GO:0005634|GO:0042054
Viun9g00937 466 SMART PostSET_3 420 436 IPR003616 -
Viun9g00937 466 FunFam Histone-lysine N-methyltransferase 211 446 - -
Viun9g00937 466 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 465 IPR025787 -
Viun9g00937 466 SMART set_7 297 420 IPR001214 GO:0005515
Viun9g00937 466 ProSiteProfiles SET domain profile. 297 414 IPR001214 GO:0005515
Viun9g00937 466 Pfam SET domain 308 413 IPR001214 GO:0005515
Viun9g00937 466 SUPERFAMILY SET domain 221 426 IPR046341 -
Viun9g00937 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 186 IPR013083 -
Viun9g00937 466 PANTHER SET DOMAIN PROTEINS 39 454 - -
Viun9g00937 466 ProSiteProfiles Post-SET domain profile. 420 436 IPR003616 -
Viun9g00937 466 CDD SET_ASHR3-like 298 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00937 Viun-Chr9 7162241 7177820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00937 278 435 C2H2 Transcription Factor Family AT2G23740 36.872 8.21e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun9g00937 SET 2.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00937 - - gmx:100791481 803.127