Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00903 ATGGATGGGAACAAGGACGACGCGTTGAAATGTTTGAGAATCGGTAAAGAGGCGTTAGAAAACGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGCGCCGCCTCGACCCCACGCTCCCCGTCGACGATCTACTGTCCACGATAGAGGCGGACGCAGGGGATAAGTCTCCTGCCAAAGAGGCAGCGGCGGAACGTACCGTGCCCCCCGATCAGCCTTCTCTCCGGCGAAGGGCGGCCGCTACCTCGGCGGCCACGGCGGGGTCGTCCTCGTCCTCTTCGGCCACGTATACCGAAGAGCAAGTTTCAATTATCAGAGAAATTAAGAGGAAGAAAAACTTTTATGAGATATTGGGATTAGAGAAAAGTTGCACTGTTGAGGATGTGAGGAAATCTTATAGGAAACTGTCCCTTAAGGTTCATCCGGACAAGAACAAAGCCCCTGGCGCTGAGGAAGCATTCAAGGCTGTGTCAAAGGCGTTTCAGTGCCTTAGCAATGAAGAGAGTAGGAGAAAGTATGATGTTTCCGGTGAAGATGAATCGATTTACGAGCAACGTGCCGCGAGGCCAGCTGCTAGGGGTTATAATGGTTACTATGAGGCTGATGTTGATGCTGAGGAGATATTTAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGTTTCAACGGCTTCAATGCTCATAGGCCTGCTGAACACGCTTCTGGTGGGTTTAATGTTCGTGCTTTAATTCAGTTGCTGCCGGTGCTACTGATTTTGCTACTAAACTTTTTGCCTTCGTCGGATCCCTTGTACTCGCTGTCGAAGAGCTATCCTTATGAGCATCGTTTAACTACACCAAAGGGTGTTAACTATTATGTCAAGTCTACAAAGTTTGTTCAGGAGTATCCGCCTGAGAGCGAAGAACGAGCAACTCTTGAAGAAAGGGTGGAGAGGGATTACTTTAGCGTTCTTCGGCAGAATTGTCATTTCGAGTTGCAGCGCCGCCAATGGGGGTATATCCGGGAAACACCGCACTGCGATATGCTGCGGAAGTTTGAGTCGGTGAATTGA 1089 0.5014 MDGNKDDALKCLRIGKEALENGDRSRALKFVTKARRLDPTLPVDDLLSTIEADAGDKSPAKEAAAERTVPPDQPSLRRRAAATSAATAGSSSSSSATYTEEQVSIIREIKRKKNFYEILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESRRKYDVSGEDESIYEQRAARPAARGYNGYYEADVDAEEIFRNFFFGGMAPAANFGGFSFGPAGFNGFNAHRPAEHASGGFNVRALIQLLPVLLILLLNFLPSSDPLYSLSKSYPYEHRLTTPKGVNYYVKSTKFVQEYPPESEERATLEERVERDYFSVLRQNCHFELQRRQWGYIRETPHCDMLRKFESVN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00903 362 PANTHER AT29763P-RELATED 1 357 - -
Viun9g00903 362 MobiDBLite consensus disorder prediction 49 97 - -
Viun9g00903 362 ProSiteProfiles dnaJ domain profile. 114 178 IPR001623 -
Viun9g00903 362 SMART dnaj_3 113 170 IPR001623 -
Viun9g00903 362 Pfam DnaJ domain 114 175 IPR001623 -
Viun9g00903 362 Pfam Domain of unknown function (DUF1977) 271 342 IPR015399 -
Viun9g00903 362 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Viun9g00903 362 CDD DnaJ 114 167 IPR001623 -
Viun9g00903 362 SUPERFAMILY Chaperone J-domain 75 174 IPR036869 -
Viun9g00903 362 Gene3D DnaJ domain 110 224 IPR036869 -
Viun9g00903 362 PRINTS DnaJ domain signature 134 149 IPR001623 -
Viun9g00903 362 PRINTS DnaJ domain signature 116 134 IPR001623 -
Viun9g00903 362 PRINTS DnaJ domain signature 150 170 IPR001623 -
Viun9g00903 362 FunFam Chaperone protein dnaJ 49 110 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00903 Viun-Chr9 6901221 6902938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00903 109 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.59e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00903 K09518 - gmx:100788812 602.823