Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00888 ATGTCTTCCATGGCCTCCACCAACCGAGACGAATCCTCCGACAACGACAGCAACTGTTCCTCGGTAACCGCACCGGACTTCTCTCGCACCTGGCTCACCACCTTTAGCTTCCTCCGCGCCAACCGCACCTCCCTTTCCCTCCCCACCGCCCAAACCACCTCAAGGGCTGCAAGCGAGGCCATGCGCCGCCTCCGCCTCCACACCGGCGCCATCGCCCTCGACCACTTCCGCCTGCTGCGCCGCCTCGGCAGCGGCGACATCGGGAACGTCTACCTCTGCCAGATACGGAACCCGGTGGTGGGGTTGCCGCAGTGCCTCTACGCCATGAAGGTGGTGGATAGAGAGGCGCTTGCCATACGGAAGAAGCTTCACCGAGCGGAGATGGAGAAGGAAATTCTGGCCATGATGGATCACCCCTTCTTGCCCACTCTATACGCTGCGTTTGATGCCTCTCATTACTCTTGCTTCGTCATGGACTTTTGTCCCGGCGGAGACTTGTTCTCCGCTCGCCAACGCCTCCCCGGAAAACGCTTTACCATCTCATCAACTAAGTTTTACGCAGCGGAGACACTCGTGGCACTGGAGTATCTGCACATGAAGGGCATAGTGTACAGGGATTTGAAGCCGGAGAATGTGCTGGTGAGAGAGGACGGTCACATTATGCTATCGGATTTTGATCTGTGTCTGAGATGCGAGGTGGTTCCGAAGCTGTTGAGAAGCAAAACCAGATCAGAACGCAGCGTGAAGACGAGAGCATCTTCCTGTGCTGCCCCCATGCAGTCCTGTTTCTCTGCCTCCTCCAAGAGAAAGAAGGTGACAACAGTTATAAGGGAAAACATGGAGGTGTGTGAGGTTGACACAGAGGTGGTGGCAGAACCCATCAATGCAAGGTCCAAGTCATTTGTGGGAACCCATGAGTACTTGGCACCTGAAGTGATTTCTGGGCAAGGGCATGGTAGTGCAGTGGATTGGTGGACTTATGGGGTTTTCTTGTATGAAATGGTGTATGGGAGAACACCCTTCAAAGGTGAGAACAATGAGAAAACACTCACCAACATTCTGAAGCAGCCATTAACTTTCCCTAGAATTACAGTGAGTAGCATCAAGGAGTGTGAAGAGATGGTGAAGGTTCAAGACCTGATCAGCAAGCTCTTGGTGAAGAACCCGAAGAAGAGAATCGGTTGCTGCATGGGATCGGTTGAGATCAAGAGGCACGAGTTCTTCAAGGGAGTGAACTGGGCTCTGATTAGATCGGTTAAACCACCCGATTTTCATGCTGATTTCAACAACATTAAGGGTAGAGTTTTGCTACAGAAACTGAGCAAGAAAGACAAGGATCAACAACCCTTTCAGATTACTACTCATCGTTTTGACTACTTCTGA 1383 0.5228 MSSMASTNRDESSDNDSNCSSVTAPDFSRTWLTTFSFLRANRTSLSLPTAQTTSRAASEAMRRLRLHTGAIALDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCLYAMKVVDREALAIRKKLHRAEMEKEILAMMDHPFLPTLYAAFDASHYSCFVMDFCPGGDLFSARQRLPGKRFTISSTKFYAAETLVALEYLHMKGIVYRDLKPENVLVREDGHIMLSDFDLCLRCEVVPKLLRSKTRSERSVKTRASSCAAPMQSCFSASSKRKKVTTVIRENMEVCEVDTEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTYGVFLYEMVYGRTPFKGENNEKTLTNILKQPLTFPRITVSSIKECEEMVKVQDLISKLLVKNPKKRIGCCMGSVEIKRHEFFKGVNWALIRSVKPPDFHADFNNIKGRVLLQKLSKKDKDQQPFQITTHRFDYF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00888 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Viun9g00888 460 Gene3D Phosphorylase Kinase; domain 1 76 164 - -
Viun9g00888 460 SMART serkin_6 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00888 460 FunFam protein kinase PINOID 2 74 160 - -
Viun9g00888 460 ProSiteProfiles Protein kinase domain profile. 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00888 460 Gene3D Transferase(Phosphotransferase) domain 1 165 422 - -
Viun9g00888 460 FunFam Serine/threonine-protein kinase OXI1 165 233 - -
Viun9g00888 460 FunFam serine/threonine-protein kinase D6PK-like 296 426 - -
Viun9g00888 460 PANTHER FLIPPASE KINASE 1-RELATED 8 426 - -
Viun9g00888 460 SUPERFAMILY Protein kinase-like (PK-like) 59 425 IPR011009 -
Viun9g00888 460 CDD STKc_phototropin_like 74 422 - -
Viun9g00888 460 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g00888 460 Pfam Protein kinase domain 77 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00888 460 Pfam Protein kinase domain 298 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00888 Viun-Chr9 6768404 6770337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00888 14 460 AGC Kinase Gene Family AT2G26700 53.831 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun9g00888 Pkinase 4.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00888 K08286 - gmx:100787216 717.227