Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00882 ATGGGAACCTCTGCAAACGCCGTTTCCGGTGGCCGAGGCGCCCCTGTTCCCAAAGACGTTGACTACGCCAATTACTTCTGCACCTATGCTTTCCTCTATCACCAGAAGGAGATGCTCTCCGATCGTGTTCGCATGGACGCTTACTTCAACGCCATCTTCGACAACAAAAAACACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCAGCGCAAGCAGGTGCGAGGAAGGTGTATGCAGTGGAAGCGACGAAGATGTCAGAACATGCCCGTGCACTCGTCAAAGCGAATAATCTCCAGAATGTAGTTGAGGTCATCGAGGGATCAATGGAGGATGTTACCTTGCCTGAGAAAGTTGACGTGATCATCTCTGAGTGGATGGGTTATTTTCTTCTGCGAGAATCCATGTTTGATTCAGTTATACATGCTCGTGACCACTGGCTCAAACCGACAGGAATGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATAGTAGATCACAAATTAGGAGAATATGAATCAACTATGGATGATTGGCGCAGCTTCGTGGATGAAACAAAAGACTACTATGGTGTTGATATGAGCACTTTAACAAAGCCTTTTTCAGATGAGCAAAGAAAATACTATCTTCAGACATCTTTGTGGAACAACCTTCATCCACATCAAGTCATTGGAACTGCTGCTATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGACTGACATAGAAAAAGTTAGATCAAACTTTTCTTTGTCAATAACGATGGAAAACGCAAAGTTGTGTGGATTTGGAGGATGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTGAACAGGAGATTGAGTTAACTACAGCTCCCAGTGTGGATTACGGTACACATTGGGGCCAACAGGTTTTTCTTTTGCATCCTCCTATGAATCTTAGTGAAGGTGATGATTTAAAGGTTTCTTTTGTGATGAGTCGCTCAAAGGGGAATCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCATTCCGGCAAGCTACTTGCACCTTTCAAAAACAAGTACTACATTGAGTAA 1122 0.4412 MGTSANAVSGGRGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFNAIFDNKKHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQNVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIHARDHWLKPTGMMYPSHARMWMAPIRTGIVDHKLGEYESTMDDWRSFVDETKDYYGVDMSTLTKPFSDEQRKYYLQTSLWNNLHPHQVIGTAAIIKEIDCLTATVTDIEKVRSNFSLSITMENAKLCGFGGWFDVHFRGRSEDPAEQEIELTTAPSVDYGTHWGQQVFLLHPPMNLSEGDDLKVSFVMSRSKGNHRLMEVELGCEIHQHSGKLLAPFKNKYYIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00882 373 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Viun9g00882 373 CDD AdoMet_MTases 63 160 - -
Viun9g00882 373 Gene3D - 166 373 - -
Viun9g00882 373 FunFam Protein arginine N-methyltransferase PRMT10 166 373 - -
Viun9g00882 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Viun9g00882 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Viun9g00882 373 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
Viun9g00882 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Viun9g00882 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 20 356 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00882 Viun-Chr9 6725661 6730782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00882 24 326 C2H2 Transcription Factor Family AT3G12270 32.099 1.78e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00882 K11434 - gmx:100795134 719.539