Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00864 ATGGCTTCTCCATGGGTTCAAGAGCTCCATATCCATCACTTCACCATTCCCGTAACCATTGATAGAATGTCTTCTGTCATGCCATCGAGGCCTATTCCTGTTAAACCAGGTGACACTTTATACCTTTCCAATCTCGATGACATGATCGGAGCTCGTGTTTTCACACCCACAGTGTATTTTTATCAGTTACACAGCACTGGTTGTTCTCCCCAGAAACCTGTCACAAAAATACTACAATGTGCTCTCGCTGATGTTTTAGTCCCTTACTACCCTTTATCAGGGAGGCTCAGAGAGACCAAAAATGGTAAACTAGAAGTGTTTTTCGGACCAGAGCAAGGAGCACTCATTGTTGAGGCACGATCTGATGTTGCCTTAACTGAATTAGGAGACCTCACAGCTCCGAACCCGGCTTGGGAGCCTTTGATCTTCAAGTTTCCGAATGAAGAACAATACAAAGTCCTGGAAATGCCGCTGGTCATTGCTCAGGTGACCCTTTTCCGATGCGGTGGTTTTAGCCTCGGGTTGAGGCTCTGCCATTGCATCTGCGATGGCATGGGAGCCATGCAATTTCTGGGTGCATGGGCCGCCACTGCAAGAACAGGGATGCTGGTCATCGACCCCGTGCCGTGTTGGGACAGGGAAGTTTTCCGGCCACGTGACCCGCCGGTGGTTAAGTTCCCTCACTTGGAGTTCATGAGAATCGAAGAGGGGTCCAACCTCACCATGACACTGTGGAAAACCAAACCGGTTCAGAAGTGTTACAGGATCAAGCGCGAGTTCCAGAATCGCGTGAAAGCTCTCGCTCAGCCGTACGACGCCGCAGGTTGCACCACTTTCGATGCCATGGCAGCGCATATATGGAGATCCTGGGTGAAAGCTCTTGATGTGAGGCCACTGGATTACCAGCTAAGGTTAACGTTTTCGGTGAATGCTCGGCAGAAGCTGAGAAACCCACCACTGAAAGAAGGGTTTTATGGCAATGTGGTGTGTGTTGCATGCACCACAAGCACTGTGTGTGAGCTTGTGCATGGAGAGCTACCTGAGACAACCTTGTTGGTTCGAGAGGCGAGACAGAGTGTGTCGGAGGAGTATTTGAGATCTACGGTGGATTATGTCGAAGTGGATCGACCAAGACAACTTGAGTTTGGTGGGAAACTAACGATAACTCAATGGACCAGGTTTTCGATATACAAATGTGCAGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGATTTAACACCCACCCCTCAAGTTTGTGTGTTTCTTCCTGAAGGAGAAGCTGATTGCAGTGATGCTTCCATGATTGTGTGCATATGCTTGCCTGAATCTGCTGCTCAAAAGTTTACACAGCTTTGTTGCTCCATTCAGATTTTTGATTCCTTATTCAACTTATCATACCTTATACTGTGTTTACTTCATCATCAATTATGCTCTCAATAA 1449 0.4783 MASPWVQELHIHHFTIPVTIDRMSSVMPSRPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQLHSTGCSPQKPVTKILQCALADVLVPYYPLSGRLRETKNGKLEVFFGPEQGALIVEARSDVALTELGDLTAPNPAWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGMLVIDPVPCWDREVFRPRDPPVVKFPHLEFMRIEEGSNLTMTLWKTKPVQKCYRIKREFQNRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARQKLRNPPLKEGFYGNVVCVACTTSTVCELVHGELPETTLLVREARQSVSEEYLRSTVDYVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSDASMIVCICLPESAAQKFTQXLCCSIQIFDSLFNLSYLILCLLHHQLCSQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00864 483 Gene3D - 15 233 IPR023213 -
Viun9g00864 483 Gene3D - 238 455 IPR023213 -
Viun9g00864 483 Pfam Transferase family 17 453 - -
Viun9g00864 483 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 32 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00864 Viun-Chr9 6534379 6535855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00864 30 455 Monolignol Biosynthesis Gene Families AT5G48930 31.066 2.93e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00864 K15400 - gmx:100802814 851.277