Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00833 ATGGCAGCAAAACTCCTTCAATCTTTAGCAGATGAAAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTTCAGCTTTTTGATCGTCACCATGCTCTCACGGCTCGCCGCATTGCCCATAAGAGACTTCCTTCTGGTAATTCACACTTCAGTGATGGAAGCTTGGAAAGAGATTCTAATAATATACACCATCGCCAAGCAACAACTGATACTAGCTTAAACAAGGGTGTGAATGAAAGGCAGAGAATTTCAACCGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCAGTGTCCTCTTTGGACTGCAAGGCTGAAGCAGAGGCTCCATTTGACCGGATTCTTTTTCCTGAAACTCCTTCAAGGGATGCAGCCATGAACCAATCAACCATCTCTTCCCATTTTGGATGTAACTCCCTTGACCTGAGGGATGTGGTAAAAGATTCTATGTATAGGGAAGCCCGAGGGCTGTCAGTGAAGACTACAGGCAAAGAAGAATCTGCCATTAACGGCATGAAGCACAGGGATTCACCGCGTCCTGTGCAGTTGCCCAAATCTGTTGATGGATCTTATAGAGGTGGAATAGATGAAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAAAGAACTTCCAAGATCATCACATGAAGTAAAAGATGGACCCTGGCATTCAAACTCAAAGGATGCTTCTTGGTTTGCTTATGAAGGAAAAGAAATAAGTCGTTTATCTTTTGAATCACGAGAGACCATCAAATCCACGCCAAAACTAAAAGAGCTTCCCAGACTTTCACTGGATAGTAAGGAAGGTTCATTACGCCCTTATAGTTCTGATTCAGCTACTCACCCGTCAAGAAACATTTACACTGGCACACCCACATCAAATGACAAATTCTCTACCCTACAACAGCCTTCAACAATCCCCAATCGTCTTCCTGGTGTTGTGGCAAAATTAATGGGCTTGGAAGCATTACCGGATTCCTCTTTGGCTGGTGACACTCAACCAAGTTCAACTGAAGCTTACTCAGCACAAGATAGTAGTCAGTTTCCAAGGTCATCAAAACCAGGACTTACCAGGCCACTCCGATTTTCTCATTCTCCGAAAATTTCATTGAAAGACCCAACTTCCCCAAGGCGAAAAAATTCTGATCTAGTAATGAAACCCATCTCAAGTTCAAGGTTTCCCATTGAACCCGCACCATGGAAGCAGCAAGATGGAAATCGAAGCTCCCAGAAACTGAATTTAAGGGGTGTAAAAGCTCCAGCGAGAGCACCAGATACCTTTCCTTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTCAGAGCATTAAAACAGATACTTGAAGCAATGCAAGAAAAGGGACTATTAGAGAGCAGAAAAGAAGAACAAGCTCCAAATGTTGTTGGAAGTCAAAATGAGTATGAACAAAAATCTACCAGCCAAGATCAGAATACCAGGTCATTAAGGCAACAAAACTCTCAGAGAAACAATTTTCTATCATCCACAATCAAGGGATCTGAATCAGCAAGGGCTTTTGAATCCCCAATAGTGATAATGAAACCAGCAAAGCTTGTTGAGAAAACTGCAATTCCTGCTTCTTCAGTCATTCCAATCGGTGGTCTTTCTGTTTCCCAGAAACACCAGAATGGCGGTGTGTATGTAGAGAATAAAACCAGTACATCTGCTACTCGAGTAGCAAAAGAACAGTCTTCCAGGAACATTCATCGGGATGCTTCTGCCAGTTCCATTGATAAGAAAGCAAATGGTAGTAAGACTACTAGATCTGCACAATCTCAATCTAGGTCTCAACAACATCTAAAAGAAAATAGCCAAAGTTCTGTGAAGCACTCAGGAACTGTGAGCCCTAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTCCACCTCCTCCACCATCAGATTCAACCAAACTCAGAAGGCAATCTGGTAAGAAGGCAACAGAGTCAGGTTCACCAGGTGGGAAACAAAGACCCAAAACCCCCAACTCGCGCCATAATGATGAGCAATTGAGTGAGATAAGCAACGAATCAAGAAGTTTAAGTTGCCTCGGGGATGAAATCTCTTTGCAATCAGACAGTTTAACTGTCAACTCAAAGATGGAAGTGGAAGTCACAAGTAGTTTAAAGTCTGTTGAAATTGATGACAGCCAAAGCCCATCTTTGAAGGGTGTGAAGCAATTGATTTCAGAGACAACGCAGAAAAAATCAACTCCAAGGTTGGATGAGGCTGAGTCAGTTGCAGAACTTGGAGCAGATGCCCCAGAGCATCCAAGTCCTATCTCAGTTCTTGATGGATCGGTGTACAGAGATGATATGCCATCCCCAGTAAAGCAGATATCTGAGGATTCAAAAGGTGATGATGGTCAAGATTCCAAAGAAAATGAGATTACAGATCAGTGGAACCCAGCAGAAAGCCTTTCATTTCACAGCATGGGATCAGGAGAGATCAATAGAAAAAAATTACAAAACATAGACCACCTTGTTCAGAAGCTTCGACGGCTGAACTCCAGTCACGATGAAGCTAGAATTGACTACATTGCTTCCCTATGTGAGAACTCAAATCCAGATCACAGATACATCTCTGAAATATTATTAGCTTCAGGCCTCTTGCTCAGAGATTTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCTTCGGGTAATCCCATTAACCCCGAGTTATTCCTTGTCTTGGAACAGACCAAGGCAAGTAGTTTGCTTTCAAAAGAAGAAAGCACCCCGGAAAAAGATTCTAACATGAAGCTGAACAAAGAGAAATTTCACAGGAAATTCATCTTTGATTCTGTGAATGAGATTCTTGGTGCCAAATTAGGCTCATCCCCAGAGCCATGGTTTCTGCCTAACAGTAACAGACTCACCAAGAAAACCTTGAGTGCTCAAAAGCTCCTCAAAGAACTATGCTTTGAGATCGAAAAGATTCAAGCCAAGAAGCCAGAATGCTGCTTAGAAGATGAAGATGATGATCTGAAAAGCATGCTGTGTCAAGATGTTATGCTTGGCTCAGAAAGTTGGACAGATTTTCATGGTTATTTACCTGGGGTTGTGTTGGATGTTGAGAGACTTATATTCAAAGACTTGGTTGATGAAGTTGTGATTGGTGAATCATCTGGTTTGCGAGTCAAGCCACCAGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3303 0.4233 MAAKLLQSLADENPDLQKQIGCMTGIFQLFDRHHALTARRIAHKRLPSGNSHFSDGSLERDSNNIHHRQATTDTSLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEAEAPFDRILFPETPSRDAAMNQSTISSHFGCNSLDLRDVVKDSMYREARGLSVKTTGKEESAINGMKHRDSPRPVQLPKSVDGSYRGGIDEKQSVPIDLKESIRVLAKLREAPWYYAETKELPRSSHEVKDGPWHSNSKDASWFAYEGKEISRLSFESRETIKSTPKLKELPRLSLDSKEGSLRPYSSDSATHPSRNIYTGTPTSNDKFSTLQQPSTIPNRLPGVVAKLMGLEALPDSSLAGDTQPSSTEAYSAQDSSQFPRSSKPGLTRPLRFSHSPKISLKDPTSPRRKNSDLVMKPISSSRFPIEPAPWKQQDGNRSSQKLNLRGVKAPARAPDTFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNVVGSQNEYEQKSTSQDQNTRSLRQQNSQRNNFLSSTIKGSESARAFESPIVIMKPAKLVEKTAIPASSVIPIGGLSVSQKHQNGGVYVENKTSTSATRVAKEQSSRNIHRDASASSIDKKANGSKTTRSAQSQSRSQQHLKENSQSSVKHSGTVSPRLQQKKLELEKRSRPPPPPSDSTKLRRQSGKKATESGSPGGKQRPKTPNSRHNDEQLSEISNESRSLSCLGDEISLQSDSLTVNSKMEVEVTSSLKSVEIDDSQSPSLKGVKQLISETTQKKSTPRLDEAESVAELGADAPEHPSPISVLDGSVYRDDMPSPVKQISEDSKGDDGQDSKENEITDQWNPAESLSFHSMGSGEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENSNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGNPINPELFLVLEQTKASSLLSKEESTPEKDSNMKLNKEKFHRKFIFDSVNEILGAKLGSSPEPWFLPNSNRLTKKTLSAQKLLKELCFEIEKIQAKKPECCLEDEDDDLKSMLCQDVMLGSESWTDFHGYLPGVVLDVERLIFKDLVDEVVIGESSGLRVKPPVRRRKLFGK 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00833 1100 MobiDBLite consensus disorder prediction 347 447 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 496 537 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 291 330 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 161 199 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 484 537 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 350 375 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 686 700 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 283 330 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 748 849 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 615 656 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 574 600 - -
Viun9g00833 1100 Pfam Domain of unknown function (DUF4378) 897 1077 IPR025486 -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 748 775 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 574 721 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 69 93 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 171 185 - -
Viun9g00833 1100 MobiDBLite consensus disorder prediction 816 835 - -
Viun9g00833 1100 PANTHER LONGIFOLIA PROTEIN 1 1098 IPR033334 GO:0051513
Viun9g00833 1100 Pfam DUF761-associated sequence motif 331 349 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00833 Viun-Chr9 6224561 6230412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00833 130 1099 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.922 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00833 - - gmx:100787391 1801.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00833 9 6224561 6230412 Viun9g00833 9 6224561 6230412 ECH
Viun3g04672 3 54134288 54139702 Viun9g00833 9 6224561 6230412 PCT