Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00827 ATGTATAGTCAAGTGAATCGTGGTTCTCATTTCGGGCAGAGTCCCGTCCCTCCGGTGCTGCCGCCTCCACCACCACCACAACCACCACAACCACCACCGCAGTATCAGCAGCCTCCGCCGCATTTCCATCAGTTCCCACCCCCTAACGTTGGTGGTCCTCCTCCTCCACCGCCTAACATTGGTGGTCCACCACCACCACCACCACCTCATCATGTTTATTTAAATGGACCTTCCCCTCCTCCTCCTCCACCGCGTCCTAATTCGTCATCCCCAATTCCCATGAACCTTCCGGTTCAAGGTTCACATAATGTGATGCCAAATGCTGGACAATCCTACCCTATCCCTTCTCAGTTACACCATGGGAACACCATGACACCGCAAACATCTTGGGCTCCAGGACCACCGGCTAGAGTATTGCCACCACCACCACCACCTCCACCCCATCCTCCCTCAGCTTCCCAAGGTCAAATTTTGTATAACCCTCCTTTCCATGGTCCACCTCTGCAACCCGGTGATGTTCAGAATCTGCATACTGCTCCTCCACCACCACCTCTTTCAACAGGTTATTTCCATTCAACTGTTGGGAATTACCGAGTGCCTCCTGGTGTTCCCCCACCGTTGCCATTGTCTCCACCACCTGCTCTTCCCGCTCCACCACCTCCTCCTCTTAATGCTCCGGTAACCTCCTCCTCCTCCACCTCAAATGTTGCAGATGACCCTCACTCTGTGAAGACTGTGGATTTGGTTGATGGAGTTGTAGCTTCTCTTCCATCTAATATTGCACCTGTACATGGTTCTGATTCTAAACGGGATGGTCCAAATTGTAGAGAGGTTGCTGGTGCTGAAAAAGAGGAGGATCTTCCCCCACCTAGGCCAACGGAAGAAAATACTGTACTGAAGATAGAAGCTTTGTGTCAGCTTATTGCTGAGAAGGGAGCTGATATTGAAGATAAGATTCGTCGAGACGAATTTCAAAATCCTGAATATGTATTTTTGTTTGGCGGAGAACCAGGAACTGAGGCTGCAATTTCTAACTCTTATTTCCTGTGGATGAAGAAGAAATATAATTTAGATACTGGATGGCATGAAAAGAAAAGGCAACCAGAGAGAATATACTCTTCAGGTGAGCAGTCTAACCTGCATGTTGCAACTGCTAGTGCTGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGACAAGGACCAAGGTTCAAACTATGCAACTGAAGCCCTAAATCGGGATGGTGAAGTGCTTAGAGTGAATCAGAATATAGCACAGCCGCAGAAATTATCAGAGAATGACCCTGCCAGGGACATCTCATCCTGCAGTCCATCATACTTTGGATCCATGGGAGTCAGCAAACAGAATGAAGGACCAGAGATTTTATCTGATCTGGAGCACAGCAAATCTGTAAGACCAGTTACCAAGGTTCAAAGTCTTGAGAATGACTCCACTGAAGTAGCTGAGTTATCCTTGGGCAAAGCTTTGGAGGAAACTGCAACTTGTGTTGATGATGATTTTGTATGTACTGTTACTTCTGATCACAATAAAACTGCTACTACTAATAGGGATTATGGGATACTCCTAGCGAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAAGGGGGATGAAAGCAATGCTGCAGATGCTAACGTTTTCACATTCTCAGAAGGTGTTGTTGATACTGGTGTTTCAGCCAGTACTCAAAAGGGGTTTGGGTCACTCTCCAGAACATCACAGGATGGTTCAGAAATATCTACACATTTATTACAAGAGTCTAAGAAAACTCGCAATCGAAAAAAATCTGTCTCACGTTGGAGTAGTGATGGATGTGTTGAGCATAACCTTGAAAATCAGATGTCCGTTAATTTTGCTTCATCGGTAGAAGCTTCCAAGGGCAAAGATAGATTAGAGGATACTGCCATTGACACTGGTAGTAGAAGTGGTAATGCTGAAAAGGAAGATGAGGGGAAAACCTCAAAATTTGAACCAAATGTTATGAAAGTAGATGAATTCGGAAGACAACTAAGAGAAGGTCTTTCAGATAGTGATTCTGATGATTCATTCCATCCACGGACACGGAGGCTTAATAAAAGAGATAGAAGAAGCTGGAGCCGCAGCCAGTCTCCCCCAGACAGGAGGAGTAGGAGGAATAGGAGGAGTCCTCGGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCACCCCGGCATCGAAGAAGCAGTAGGTCACCAATCTCAAGACGTTCAGGTGACTTTCGTGGTGAGAATGTTAAAAGGGAGAAGGATCAGTGCTTTGACTTTCTTCGAGGAAAGTGCTATCGGGGAGCATCTTGCAGGTACATTCACCATGAATCTGACATGTATGCAACTTCAAGGCGCTCTAAGAATAAACATGATCTGGAAGTCAGTTATGGTGGAAAAGAATCAAAGACTAATGGAGACATGACGAATATTTCATCTAAAGTGTTTGATAATGAGCATGATGGAGTTAGAAGTCAGGATGATGATCTTAGTCTGAATGTGACTAGCCAGGAAGTAGTGCAGAAAAAAGAAGATTCAGGGAGGAATGTTGTTGCATCAACTATCATTCATCTTGATGGCCTATCAGTTAATAGCAATCTAGGTAAATCTAAATCTATCAGAGAGGTTGCTCCTGAAATGCAGGAAACCATTGATGTGAGGGAGGATCCAAGGAATTCAATCCATGGGAATGATAGTTCGGAAGCAGGTGATTCTCAACAGCAACACATGGTTGAAGGCTTTCACCCTGATGCTTTAGGCCGTGATAATACTTCTAAATCATCTGGTACATATAAAGATGTCATTCCCTCAGGAGACGGTCGTTTTGCTCAGAAAATGCAACTTGGTGTTTCTGCTGCTGGAATTCTGGAACATTCGGGTTATCCATCTCAGCATGTAAATGCATCCTCTGTGACTGATGCATCACCTGATAAAAGATCAACTGTTTCTACTAGTATTACTGAAGTTCCTGATAGTGTCACATCAGAGCAGGCTTCATTGAACCCTCAGGCTTCAAAAGAGTTACCTCCACAGTGTGGCTCTTCAGTGGAATTTCCACGTCATAATTACCAGTTGTCTGCACCTGTTGTTTCACATTCCCCTGGCGAAAATCCTGTGCACATGCCACAAATTTCAAGGCAGTATGATGTGATGCAACAAAGGGCATTCTTTCCTTTCCAATCCACTGCCAGAGAAAAGTTTGAACCTTACCCAGCTCCTTTACACATGCAGAATACTCACCTCAATGTACCACCTAATAGCTCTTGGACATCATTGCCATTGCCACCGCCACTGCCACCACTGCCACCCCCGCCATCCAGAGTGGTGTATGATTCCAATGTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAATTTATTCAGAGTCAAATGCATTCAAGGACTGACTTTGTTTCCCAGACTTCCATGAAGCCTTTACCAAGTTGCTCTGAGAAATCTGAATTTCAGGATATAGCATACCCTCCCATGCAGGATCATTCACGAACTTTGATGCTTACTGAACCTTTCTCTCCAAAGCAACTTCCTCAAGGGAACCCAGCTAGTCAATTACTTTCAGGATCTAGTCTCAACGGAGATGAATTTCATAATCAACTTCCATTGCAGGATTCAAAATTTTCCAGTGCGACATCATTTGGCAGCTTGCAGCCTCAACAAAATCAATTTTCCTGGAAATCGGATGTGAACAGACTACAATCTTCTCTGGGTGGCAAGTTACCCCCCGAAGGACATTTTATGACAACCTCACACATTGATTCATCATCACAGAAACAACAATCAATGTACAATTTTCAGTGTTCTGTACCCGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAGTCATTCAACTTCTCTTCCACCGTTTAGTGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTTAGTTCAAGTATTTTTAGACAGGAAAATGAAATAGTCCATGGTAACAATTTTGCTTCTTCTAGATTGAACGATACTACTGTAAATGGGGAGGTTGATGGTGGGGTTGGATCGAGACATTCAGCATCTGCACCAAAATCAGGTAGAGCTCTTGGTCAGATTTTGCCTAGGTCTGGTGGTGACCAATACGATCCACTTTTTGACAGCATTGAACCATCATCCTCTTTGAGAAAAACTGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCGATGTCAGCCTAAGGCCCAAAAGTTCTTACATCTCTTTGGATGTGGATGAGAAAAACAAGCAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATACAGTGAGACGGCGGATGCAGAAGTTGGTGCTATTGAAAATGAGAGCCTAAGTGATGATGTGGATTTTGCAAAAGTTACTACAAAGGAGGTTGAGAGTAATCGGGTCAAGTCTCCTGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCGATGAAATTGTTCAAAGTTTCTATTGCGAACTTTGTAAAGGAGGTTTTGAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTTGCTTTTAAAACCATTGTGAAAAAGACCGTGGATAAAGTGTCAGGAGCCATGAAAGGCCACCGTGTACCCAAGTCCCAAGCAAAGATAAGTCAATATATCGATTCATCGCAGCGAAAGTTGACTAAACTTGTGATGGGTTACGTTGACAAGTATGTGAAGGTATGA 4833 0.4393 MYSQVNRGSHFGQSPVPPVLPPPPPPQPPQPPPQYQQPPPHFHQFPPPNVGGPPPPPPNIGGPPPPPPPHHVYLNGPSPPPPPPRPNSSSPIPMNLPVQGSHNVMPNAGQSYPIPSQLHHGNTMTPQTSWAPGPPARVLPPPPPPPPHPPSASQGQILYNPPFHGPPLQPGDVQNLHTAPPPPPLSTGYFHSTVGNYRVPPGVPPPLPLSPPPALPAPPPPPLNAPVTSSSSTSNVADDPHSVKTVDLVDGVVASLPSNIAPVHGSDSKRDGPNCREVAGAEKEEDLPPPRPTEENTVLKIEALCQLIAEKGADIEDKIRRDEFQNPEYVFLFGGEPGTEAAISNSYFLWMKKKYNLDTGWHEKKRQPERIYSSGEQSNLHVATASADSDMEMEDDITLSDKDQGSNYATEALNRDGEVLRVNQNIAQPQKLSENDPARDISSCSPSYFGSMGVSKQNEGPEILSDLEHSKSVRPVTKVQSLENDSTEVAELSLGKALEETATCVDDDFVCTVTSDHNKTATTNRDYGILLASGSPIRLLQDYASDDTSAKGDESNAADANVFTFSEGVVDTGVSASTQKGFGSLSRTSQDGSEISTHLLQESKKTRNRKKSVSRWSSDGCVEHNLENQMSVNFASSVEASKGKDRLEDTAIDTGSRSGNAEKEDEGKTSKFEPNVMKVDEFGRQLREGLSDSDSDDSFHPRTRRLNKRDRRSWSRSQSPPDRRSRRNRRSPRRRRDKRNRSRSWSPRHRRSSRSPISRRSGDFRGENVKREKDQCFDFLRGKCYRGASCRYIHHESDMYATSRRSKNKHDLEVSYGGKESKTNGDMTNISSKVFDNEHDGVRSQDDDLSLNVTSQEVVQKKEDSGRNVVASTIIHLDGLSVNSNLGKSKSIREVAPEMQETIDVREDPRNSIHGNDSSEAGDSQQQHMVEGFHPDALGRDNTSKSSGTYKDVIPSGDGRFAQKMQLGVSAAGILEHSGYPSQHVNASSVTDASPDKRSTVSTSITEVPDSVTSEQASLNPQASKELPPQCGSSVEFPRHNYQLSAPVVSHSPGENPVHMPQISRQYDVMQQRAFFPFQSTAREKFEPYPAPLHMQNTHLNVPPNSSWTSLPLPPPLPPLPPPPSRVVYDSNVNSGVVKSYISSEFIQSQMHSRTDFVSQTSMKPLPSCSEKSEFQDIAYPPMQDHSRTLMLTEPFSPKQLPQGNPASQLLSGSSLNGDEFHNQLPLQDSKFSSATSFGSLQPQQNQFSWKSDVNRLQSSLGGKLPPEGHFMTTSHIDSSSQKQQSMYNFQCSVPEANLGVPGETATVSRYPPDFLDSSHSTSLPPFSGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIVHGNNFASSRLNDTTVNGEVDGGVGSRHSASAPKSGRALGQILPRSGGDQYDPLFDSIEPSSSLRKTDFDQKQEVTGESDVSLRPKSSYISLDVDEKNKQEEVGAVASTTSQNNDEYSETADAEVGAIENESLSDDVDFAKVTTKEVESNRVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV 1610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00827 1610 MobiDBLite consensus disorder prediction 199 226 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 92 130 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 15 91 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 259 294 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 894 914 - -
Viun9g00827 1610 SUPERFAMILY Surp module (SWAP domain) 287 354 IPR035967 GO:0003723|GO:0006396
Viun9g00827 1610 MobiDBLite consensus disorder prediction 598 617 - -
Viun9g00827 1610 Gene3D - 769 823 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 893 955 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 581 597 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 641 704 - -
Viun9g00827 1610 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 312 1609 - -
Viun9g00827 1610 Gene3D Surp module 274 358 IPR035967 GO:0003723|GO:0006396
Viun9g00827 1610 MobiDBLite consensus disorder prediction 726 755 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 1465 1481 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 1425 1441 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 133 152 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 581 618 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 639 766 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 983 1035 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 1196 1224 - -
Viun9g00827 1610 ProSiteProfiles Zinc finger C3H1-type profile. 770 797 IPR000571 GO:0046872
Viun9g00827 1610 MobiDBLite consensus disorder prediction 269 291 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 1 242 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 983 1029 - -
Viun9g00827 1610 MobiDBLite consensus disorder prediction 1367 1483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00827 Viun-Chr9 6175048 6184191 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Viun9g00827 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00827 - - vum:124822814 2601.62