Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00822 ATGACGTTGGGCGCGAAATATGCAAACGCGCGTTTCCTCGGAAGCACTTCCGCTTTCTCCCACTACAGAAAAAAAATCGCGGTGGCGAATCTATTCCAGAAGTACGGTTTCCCTCCTTCCCTCGTCTCCTTCTTCCTCTCTCGCAACCCTTCCATTCTCCACTCTCCTCTCCCTCAACTCCACCATTCGCTCACCACACTCTTCTCCCTCCGCATCCCCCAAAACGACATCGTTTCCCTCCTCACTACCAATCCTTCCCTCCTCCACCATTCCTTCCACGACGCCCTCCAATCCCGTCTCCCCCAACTCCAAACGCGCTTCCCCACACTCTCCCCTTCCACCCTCCTCAACCTCTTCCTCTCTTCCACAAAGTTACACCTCGACCCGCTCCACCTCTCCCCCAAACTCAACGCGCTCAAAACCGATTTCGCGTTTTCCGACGCCACCGTGGCTAGCGTTCTGGAAGGGTTCCCCGACGTGGTCGTCACGAGCGAGAACGAAATCGCGAGCGTGATAGATTTTCTTGCGGAGTTCGGAATTCCGCGGGACGAGATTGATCTCGTTGTCCGTTCCTTTCCTAGGGTTTTGGCGCTCGGTGTTGAGCAGAGGCTGAGGCCGTTGTTTCGGGAAATCAAGGAGCTAGGGTTTTCCAATCGTGAGATGAGGAGAGAGATCTCGCGGGACCCGAGGATTCTGGGGATGGAAATTGGAGAGCTTACGCGGTGTTTGAGGCTGATAGAGAGTTTGAAATGCAGGGAAAGTATCAAAGAGAGGGTTATTGATTCGGGTCTGATGAGAGCGTGTTTTGAGGTGAAATTAAGAGTGGATTGTTTGTGTGGGTATGGTTTGACTCGAAGGGATGCTCTGAAGATTATCTGGAAGGAGCCTCGGGTGATTTGTTACGAGGTTGGGGATATTGAGAGGAAGGTTGAGTTTCTGGTGCAGAGGATGAAGTGTAGTGTGGAGTGTTTGGCTGAGGTGCCTAAATACTTGGGTGTGAATTTTGAGAAGCAGATTGTGGCCAGGTACAGTGTGGTGGAGTGTTTGAGGGGGAAGGGTGCCATTGGGTTTGAGATTGGGTTGAAGGATTTGGTTATGCCTTCTAGGCTTAGGTTCTATAATCTTTATGTGAAGCCATACCCGGAGTGTGAAAAGATCTATGGAAGGTTTTCTGGGTGTGGTGTTCAAGTTAAGATGAAGCATCCCCCTGGACTGTGGAAACTTTTTAAACCGCAGAAGTTTGCTGAAAGGGATGAAGATGTGAAGAACGTGAGGTCATTCATGGAGTCTCTGGTTTAG 1299 0.5089 MTLGAKYANARFLGSTSAFSHYRKKIAVANLFQKYGFPPSLVSFFLSRNPSILHSPLPQLHHSLTTLFSLRIPQNDIVSLLTTNPSLLHHSFHDALQSRLPQLQTRFPTLSPSTLLNLFLSSTKLHLDPLHLSPKLNALKTDFAFSDATVASVLEGFPDVVVTSENEIASVIDFLAEFGIPRDEIDLVVRSFPRVLALGVEQRLRPLFREIKELGFSNREMRREISRDPRILGMEIGELTRCLRLIESLKCRESIKERVIDSGLMRACFEVKLRVDCLCGYGLTRRDALKIIWKEPRVICYEVGDIERKVEFLVQRMKCSVECLAEVPKYLGVNFEKQIVARYSVVECLRGKGAIGFEIGLKDLVMPSRLRFYNLYVKPYPECEKIYGRFSGCGVQVKMKHPPGLWKLFKPQKFAERDEDVKNVRSFMESLV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00822 432 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 SMART mt_12 43 73 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 Gene3D Transcription termination factor 3, mitochondrial 160 390 IPR038538 -
Viun9g00822 432 PANTHER CGI-12 PROTEIN-RELATED 126 380 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 FunFam Transcription termination factor MTERF15 mitochondrial 165 387 - -
Viun9g00822 432 Pfam mTERF 273 362 IPR003690 GO:0003690|GO:0006355
Viun9g00822 432 Pfam mTERF 133 239 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00822 Viun-Chr9 6136647 6141664 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun9g00822 mTERF 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00822 - - vum:124840038 699.508