Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00818 ATGGAACAAAAAGTGTTACATGGCATTGGATCTCTTGTCCCTCGTGGTGCTTTTGCAGTCTTGCTCCTGCTACTGTTCTTTTTCTCCTCATTCACTTCTACAGAAGCCTATGACCCGCTTGATCCAACTGGCAATATAACAATCAAATGGGATGTCATTAGCTGGACTCCAGATGGCTATCTTGCTGTTGTTACAATGTACAACTTTCAACAATATCGTCACATTCAGTCCCCTGGATGGTCATTAGGGTGGACATGGGCTAAAAAAGAAGTAATTTGGAACATGATGGGAAGCCAAACCACAGAGCAAGGGGACTGTTCAAAGTTCAAAGCAGGTATTCCTCATTGTTGTAAGAAGGACCCAACAGTGGTGGACTTACTGCCAGGGACTCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGGGGTGTCCTAAATTCATGGGGTCAGGACCCTAGTAGTGCAGTAAGTTCTTTCCAGATTAGTGTTGGCTCTGCTGGAACCACAAACAAAACGGTCAAACTGCCTAAAAATTTTACCCTCAAAGCACCGGGACCTGGCTACACTTGTGGTCCTGCAAAGGTTGTGAAACCAACTACATTTATTACCAGTGACAAGAGGAGAACCACCCAAGCCATGATGACTTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGACTCCAAGTTGTTGTGTTTCCCTCTCATCCTTCTATAATGACACAGTAGTAAACTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACAGAATCTGGCAGCTGTGTGGAACCAAATTCACCACATTTAGCTTCAGTTGTATCATCATCATCAGCAAAAGGTGCAAACACACCCCTAGTTCAGTGCACCAGCCACATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCAATTACAAAGAGTACTGGAGGGTCAAGATCACAATTACTAATTTCAATTACAGAATGAACTACTCACAGTGGAACCTTGTTGTGCAGCATCCCAATTTAGATAATATTACCCAGCTCTTCAGTTTTCAGTACAAGTCACTTACACCCTATGAGGGCTTGAATGATACAAGTATGCTGTGGGGAATCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGACCTCTTGGTAACGTTCAATCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCATTCCCTAGAAGGATTTATTTCAACGGGGATAACTGTGTTATGCCTCCTCCAGATGCCTACCCTTGGCTGCCAAATGCAAGTTCTAAACTAGTTTTCTCTGTGCTATGTACACTCATAGCCACTTTAGCTTCTTTGTTAAGTGTTATTTAA 1362 0.4273 MEQKVLHGIGSLVPRGAFAVLLLLLFFFSSFTSTEAYDPLDPTGNITIKWDVISWTPDGYLAVVTMYNFQQYRHIQSPGWSLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWGQDPSSAVSSFQISVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKVVKPTTFITSDKRRTTQAMMTWNITCTYSQFLAQKTPSCCVSLSSFYNDTVVNCPTCTCGCQNKTESGSCVEPNSPHLASVVSSSSAKGANTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFSFQYKSLTPYEGLNDTSMLWGIKFYNDFLSSAGPLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSVLCTLIATLASLLSVI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00818 453 PANTHER PROTEIN COBRA 24 442 IPR006918 GO:0010215|GO:0016020
Viun9g00818 453 PIRSF COBRA 11 453 IPR006918 GO:0010215|GO:0016020
Viun9g00818 453 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00818 Viun-Chr9 6122037 6125774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00818 48 439 COBRA Gene Family AT5G60920 81.218 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00818 - - gmx:100815779 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00818 9 6122037 6125774 Viun9g00818 9 6122037 6125774 ECH
Viun3g04683 3 54222972 54226505 Viun9g00818 9 6122037 6125774 PCT