Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00817 ATGGAATCTGACAGTGGTAAACGGCAGCAAAAGAGCACCTTTGGATGCTTCAAGTTGGTTGCCTTAATCGCTCTATGCTTTGTTTTAATTTCTCCAGCAGAATCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGATATTTGGCCACTGTGACATTGTTTAACTTCCAATTGTACCGCAATATTATGAATCCTGGGTGGACTCTGGGGTGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGGTGGGGGCTCAAGCCACAGAGCAAGGAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTGAAGTGGTTGACTTGCTACCTGGAGCTCCTTTCAACATGCAGTTCACCAATTGCTGCAGGGGTGGTGTGCTTACATCTTGGGGACAGAACCCTTCAGGTGCAGTCTCTTCATTTCAGATAGGTGTAGGGCTCTCTGGCACCTCCAACAAGACAGTCAAATTGCCTAAGAACTTCAAATTGCTGGGACCTGGACCAGGATATTCATGTGGCCCTGCTAAGGTTGTTCCATCCACTGCAATCCTCACAGATGATCGAAGGCGAAAAATGCAGGCATTGATGTCTTGGAATGTGACATGCACTTATTCACAGTTTCTTGCCTCCAAGAACCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAATCACAGGTTGTCCACCTTGTGCTTGTGGTTGCCAGAATAACGATACATGTGTCACGAAAGACTCAAAGATCCTGCAAGAGAATGTCACCTCAACTCATCGAAAATCAGACATCACACCAAAACCATTGTTACAATGCACACACCACCTGTGTCATGTCCGGGTGCACTGGCATTTGAAAGACAACTATCAGGACTATTGGCGTGTCAAGATTGCCATTATCAACTTCAACTATCGATTGAATTTCACTGACTGGTCTCTTGTTGTGCAGCACCCCAATCTCAATAATGTAACCCAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTTCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTGAAGCAGGGATGGGCATTTCCTAGGAGAGTCTACTTTAATGGTGATGAATGCATGCTGCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGCCCACAAAACACCAACAACTATTACATTGATGGCAACCTATGTGGTTTTCACATTATTTTTTCATTTGGTTGCAACACTTTTTTGA 1371 0.4384 MESDSGKRQQKSTFGCFKLVALIALCFVLISPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMVGAQATEQGNCAKFKLKIPHSCKRNPEVVDLLPGAPFNMQFTNCCRGGVLTSWGQNPSGAVSSFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKVVPSTAILTDDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKITGCPPCACGCQNNDTCVTKDSKILQENVTSTHRKSDITPKPLLQCTHHLCHVRVHWHLKDNYQDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKTPTTITLMATYVVFTLFFHLVATLF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00817 456 PIRSF COBRA 8 455 IPR006918 GO:0010215|GO:0016020
Viun9g00817 456 PANTHER PROTEIN COBRA 23 442 IPR006918 GO:0010215|GO:0016020
Viun9g00817 456 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00817 Viun-Chr9 6119270 6121839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00817 12 450 COBRA Gene Family AT3G02210 56.787 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00817 - - gmx:100813134 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00817 9 6119270 6121839 Viun9g00817 9 6119270 6121839 ECH