Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun9g00794 | ATGGAAGCTAGTACAGGTCTTTTTGCTGGTTCTCCAAACAGCAAAGAGCTTGTGGCCATTCAAGGACCCGATGAGCCTAAGCCGGTGAAGAACTTAGATGGTCAGCTTTGTGAGATATGTGGTGATTCTGTGGGAGTTACAGTTGAAGGAGACTTGTTTGTAGCTTGTGAAGAGTGTGGTTTCCCTGTATGCAGGCCATGCTATGAGTATGAGAGAAGGGAAGGGACTCAAGTTTGTCCTCAGTGTCATACAAGATACAAGCGCATCAAAGGAAGTCCAAGAGTGGAGGGAGATGAGGATGAAGACGACGTGGATGATATTGAACATGAATTCAAGCATGAAGAGATGCATAAGGGAAACATGATCCATGGAGATGATGATGGGAATTCTAAATCAGGTTTAGCAAAGGTGAATGGGGAGCTGCTATCTACAAGTGTGGGAGAACCTGAAGCAGGTGCAAAGTTGGATGAGAAGGAGAACATAGATGAGTGGATGTTGCGCCAAGGGAATCTGTGGCCTGAAACTGATGATTCAGTTGATCAGGAAAAGGCCATGAAAGAGCCATTGTCAAGGAAAGTAGCAATACCATCTGGCAAACTCAGTCCTTACAGAATGATGGTTGTGGCTAGATTCCTCCTTCTATTACTCTTCTTTCAGTACAGAATTTTCCACCCAGTACCTGATGCAGTTGGACTATGGTTCATATCTGTAACGTGTGAAATCTGGCTTGCATTATCCTGGATGATTGATCAGATTCCCAAATGGTTTCCCATCGATCGGGAGACATATCTTGATCGTCTTTCAATCAGGTTTGAACAAGAGAACAAGCCAAACATGCTTTCTCCAATAGATATCATTGTAACTACTGTGGATCCAATCAAGGAACCTCCACTTGTGACAGCCAATACTGTTCTTTCAATCTTGGCCCTGGATTACCCTGCTGACAAAATCTCATGCTATGTTTCTGATGACGGAGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACAGCTGAGTTTTCCAGAAAGTGGGTTCCTTTCTGCAAAAAGTTCTCTATAGAACCCAGAGCACCAGAAAAGTACTTCTCTGATAAAATAGATTTTCTAAAGGATAAGCTTCAATCCACTTACGTAAAAGAACGCCGTACTATGAAGAGAGAATACGAAGAATTTAAGGTGAGAATAAATGCACTGGTGGCTAAATCTATGCGAGTTCCCCCAGAAGGGTGGACTATGAAAGATGAGACACCATGGCCAGGAAACAACCCCAAAGATCATCCAAGTATGATACAGGTCCTTCTTCCTCACAATGTAGGTAGTGAACTTCCTTGTCTTGTCTATACATCTCGTGAGAAAAGGCCTGCATTTCAACACCACGGCAAAGCTGGTGCAATCAACGCCTTGCTTCGAGTATCGGCAGTGTTAAGCAATGCTCCTTTTGTGCTCAATTTGGATTGCAATCACTATGTAAATAACAGCAAAGTCGTGCGAGAGGCCATGTGTTTCTTTATGGACATACAACTTGGGAATGGCATTGGCTTTGTACAGTTTCCACTAAGATTTGACAGCCTAGATAGGCATGATCGTTATGCCAACAAAAACACTGTTTTATTTGATATTAACTTGAGGTGCCTAGATGGACTTCAGGGACCGGCTTATGTTGGTTCAGCATGTATCTTCAGAAGGAAATCCTTAACTGGCTGTGACTCACCAGTGTCTTCAAAACGCCCAAGCATGGTGCAAGTACACTCAAAACAGGATGAGAATGGAGAAGAAGCTAGCATAACAGCAGCAACAGATGAGGAAAAGGAACTATTGAAGTCGCAGAAGAATGATGAAAATAAATTTGAGAAGTCCACACATACCATGAACTCTTCATTAACAGAAGAAGGTGGTGTTGATCCTTCTTCCAGTCAGGAAGTCCTGCTTAAAGAAGCTATTCATGTCATGGGTTCTAAATATGAAGACAGAACTCTCTGGGGATATGAGATGGGTTTAAGCTATGGATCTATAGCAGCAGATACTCTGACAAGTTTAAAGATGCATTGTCATGGTTGGAGATCTGTATATTGCATGCCAAAAAGAGATCCATTCAGGGGTACAGCTCCTATCAACCTCACAGATAGACTCAACCAGGTGCTGAGATGGGCAGTGGGATCACTTCAGATCTTATTCAGCCACCATTGCCCTCTTCTGTATGACCTCAATAGTGGAAGACTCAAAGGACTCCAAAGGATTGCCTATATTAACAGCACTGTCTACCCCTTCAGCTCAATACCCCTCCTAATATACTGTATCGTTCCTGCTATATGCTTGCTCACTGATAAATTCATCACACCATCGGTTGGCACTTTTGCAAGTCTAGTTTTCACCGCATTGTTCATCTCAATCTTTGCCTCGGCGATTCTTGAATTGAGATGGAGTGGAGTTGGCCTGGAGGAATGGTGGAGAAGCCAGCAATTCTGGGTGATTGGGAGTGTGTCTGCGAACCTCTTTGCCGTTGTGCAGAGCATTATGGGAGCTCTTCCACTGGGAAGAGTGAACACAAACTTCAGCATTGTATCAAAGGCACCAGACGATGTAGAATTTCGTGAACTGTATACCATTCGATGGACTGCACTTCTAATACCTCCAACCACCATCATAATAATCAACCTCATTGGTATTGTGGCTGGCTTCACAGATTCCATAAACAGTGGAGAACATTCTTGGGGAGCACTGCTTGGGAAACTGTTCTTTTCTTTATGGGTTATTGTCCATTTGTACCCTTTCCTTAAAGGTCTAATGGGTAGGCAGAACAGAACACCAACTCTTGTTGTCATATGGTCTGTGCTCTTGGCTTCTATCTTCTCCTTGGTTTGGGTGAGAGTTGACCCTTTTGTGTTGAAAACAAAGGGGCCTGATGTCAAGCAATGTGGAATCAGTTGCTGA | 2931 | 0.434 | MEASTGLFAGSPNSKELVAIQGPDEPKPVKNLDGQLCEICGDSVGVTVEGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKHEEMHKGNMIHGDDDGNSKSGLAKVNGELLSTSVGEPEAGAKLDEKENIDEWMLRQGNLWPETDDSVDQEKAMKEPLSRKVAIPSGKLSPYRMMVVARFLLLLLFFQYRIFHPVPDAVGLWFISVTCEIWLALSWMIDQIPKWFPIDRETYLDRLSIRFEQENKPNMLSPIDIIVTTVDPIKEPPLVTANTVLSILALDYPADKISCYVSDDGASMLTFEALQETAEFSRKWVPFCKKFSIEPRAPEKYFSDKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNPKDHPSMIQVLLPHNVGSELPCLVYTSREKRPAFQHHGKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRHDRYANKNTVLFDINLRCLDGLQGPAYVGSACIFRRKSLTGCDSPVSSKRPSMVQVHSKQDENGEEASITAATDEEKELLKSQKNDENKFEKSTHTMNSSLTEEGGVDPSSSQEVLLKEAIHVMGSKYEDRTLWGYEMGLSYGSIAADTLTSLKMHCHGWRSVYCMPKRDPFRGTAPINLTDRLNQVLRWAVGSLQILFSHHCPLLYDLNSGRLKGLQRIAYINSTVYPFSSIPLLIYCIVPAICLLTDKFITPSVGTFASLVFTALFISIFASAILELRWSGVGLEEWWRSQQFWVIGSVSANLFAVVQSIMGALPLGRVNTNFSIVSKAPDDVEFRELYTIRWTALLIPPTTIIIINLIGIVAGFTDSINSGEHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC | 976 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun9g00794 | 976 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 283 | 778 | IPR029044 | - | |
| Viun9g00794 | 976 | CDD | mRING-HC-C4C4_CesA | 35 | 85 | - | - | |
| Viun9g00794 | 976 | MobiDBLite | consensus disorder prediction | 576 | 635 | - | - | |
| Viun9g00794 | 976 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 187 | 943 | - | - | |
| Viun9g00794 | 976 | Pfam | Cellulose synthase | 591 | 970 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
| Viun9g00794 | 976 | Pfam | Cellulose synthase | 283 | 581 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
| Viun9g00794 | 976 | Pfam | Zinc-binding RING-finger | 27 | 104 | IPR027934 | - | |
| Viun9g00794 | 976 | MobiDBLite | consensus disorder prediction | 620 | 635 | - | - | |
| Viun9g00794 | 976 | Coils | Coil | 381 | 401 | - | - | |
| Viun9g00794 | 976 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 435 | 570 | IPR029044 | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun9g00794 | K10999 | - | gmx:100777270 | 1777.68 |
Showing 1 to 1 of 1 entries