Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00791 ATGGAAGCTAGTACAGGTCTTTTTGCTGGTTCTCCAAACAGCAAAGAGCTTGTGGCCATTCAAGGACCCGATGAGCCTAAGCCGGTGAAGAACTTAGATGGTCAGCTTTGTGAGATATGTGGTGATTCTGTGGGAGTTACAGTTGAAGGAGACTTGTTTGTAGCTTGTGAAGAGTGTGGTTTCCCTGTATGCAGGCCATGCTATGAGTATGAGAGAAGGGAAGGGACTCAAGTTTGTCCTCAGTGTCATACAAGATACAAGCGCATCAAAGGAAGTCCAAGAGTGGAGGGAGATGAGGATGAAGACGACGTGGATGATATTGAACATGAATTCAAGCATGAAGAGATGCATAAGGGAAACATGATCCATGGAGATGATGATGGGAATTCTAAATCAGGTTTAGCAAAGGTGAATGGGGAGCTGCTATCTACAAGTGTGGGAGAACCTGGTGCAAAGTTGGATGAGAAGGAGAACATAGATGAGTGGATGTTGCGCCAAGGGAATCTGTGGCCTGAAACTGATGATTCAGTTGATCAGGAAAAGGCCATGAAAGAGCCATTGTCAAGGAAAGTAGCAATACCATCTGGCAAACTCAGTCCTTACAGAATGATGGTTGTGGCTAGATTCCTCCTTCTATTACTCTTCTTTCAGTACAGAATTTTCCACCCAGTACCTGATGCAGTTGGACTATGGTTCATATCTGTAACGTGTGAAATCTGGCTTGCATTATCCTGGATGATTGATCAGATTCCCAAATGGTTTCCCATCGATCGGGAGACATATCTTGATCGTCTTTCAATCAGGTTTGAACAAGAGAACAAGCCAAACATGCTTTCTCCAATAGATATCATTGTAACTACTGTGGATCCAATCAAGGAACCTCCACTTGTGACAGCCAATACTGTTCTTTCAATCTTGGCCCTGGATTACCCTGCTGACAAAATCTCATGCTATGTTTCTGATGACGGAGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACAGCTGAGTTTTCCAGAAAGTGGGTTCCTTTCTGCAAAAAGTTCTCTATAGAACCCAGAGCACCAGAAAAGTACTTCTCTGATAAAATAGATTTTCTAAAGGATAAGCTTCAATCCACTTACGTAAAAGAACGCCGTACTATGAAGAGAGAATACGAAGAATTTAAGGTGAGAATAAATGCACTGGTGGCTAAATCTATGCGAGTTCCCCCAGAAGGGTGGACTATGAAAGATGAGACACCATGGCCAGGAAACAACCCCAAAGATCATCCAAGTATGATACAGGTCCTTCTTCCTCACAATGTAGGTAGTGAACTTCCTTGTCTTGTCTATACATCTCGTGAGAAAAGGCCTGCATTTCAACACCACGGCAAAGCTGGTGCAATCAACGCCTTGCTTCGAGTATCGGCAGTGTTAAGCAATGCTCCTTTTGTGCTCAATTTGGATTGCAATCACTATGTAAATAACAGCAAAGTCGTGCGAGAGGCCATGTGTTTCTTTATGGACATACAACTTGGGAATGGCATTGGCTTTGTACAGTTTCCACTAAGATTTGACAGCCTAGATAGGCATGATCGTTATGCCAACAAAAACACTGTTTTATTTGATATTAACTTGAGGTGCCTAGATGGACTTCAGGGACCGGCTTATGTTGGTTCAGCATGTATCTTCAGAAGGAAATCCTTAACTGGCTGTGACTCACCAGTGTCTTCAAAACGCCCAAGCATGGTGCAAGTACACTCAAAACAGGATGAGAATGGAGAAGAAGCTAGCATAACAGCAGCAGCAACAGATGAGGAAAAGGAACTATTGAAGTCGCAGAAGAATGATGAAAATAAATTTGAGAAGTCCACACATACCATGAACTCTTCATTAACAGAAGAAGGTGGTGTTGATCCTTCTTCCAGTCAGGAAGTCCTGCTTAAAGAAGCTATTCATGTCATGGGTTCTAAATATGAAGACAGAACTCTCTGGGGATATGAGATGGGTTTAAGCTATGGATCTATAGCAGCAGATACTCTGACAAGTTTAAAGATGCATTGTCATGGTTGGAGATCTGTATATTGCATGCCAAAAAGAGATCCATTCAGGGGTACAGCTCCTATCAACCTCACAGATAGACTCAACCAGGTGCTGAGATGGGCAGTGGGATCACTTCAGATCTTATTCAGCCACCATTGCCCTCTTCTGTATGACCTCAATAGTGGAAGACTCAAAGGACTCCAAAGGATTGCCTATATTAACAGCACTGTCTACCCCTTCAGCTCAATACCCCTCCTAATATACTGTATCGTTCCTGCTATATGCTTGCTCACTGATAAATTCATCACACCATCGGTTGGCACTTTTGCAAGTCTAGTTTTCACCGCATTGTTCATCTCAATCTTTGCCTCGGCGATTCTTGAATTGAGATGGAGTGGAGTTGGCCTGGAGGAATGGTGGAGAAGCCAGCAATTCTGGGTGATTGGGAGTGTGTCTGCGAACCTCTTTGCCGTTGTGCAGAGCATTATGGGAGCTCTTCCACTGGGAAGAGTGAACACAAACTTCAGCATTGTATCAAAGGCACCAGACGATGTAGAATTTCGTGAACTGTATACCATTCGATGGACTGCACTTCTAATACCTCCAACCACCATCATAATAATCAACCTCATTGGTATTGTGGCTGGCTTCACAGATTCCATAAACAGTGGAGAACATTCTTGGGGAGCACTGCTTGGGAAACTGTTCTTTTCTTTATGGGTTATTGTCCATTTGTACCCTTTCCTTAAAGGTCTAATGGGTAGGCAGAACAGAACACCAACTCTTGTTGTCATATGGTCTGTGCTCTTGGCTTCTATCTTCTCCTTGGTTTGGGTGAGAGTTGACCCTTTTGTGTTGAAAACAAAGGGGCCTGATGTCAAGCAATGTGGAATCAGTTGCTGA 2928 0.4341 MEASTGLFAGSPNSKELVAIQGPDEPKPVKNLDGQLCEICGDSVGVTVEGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKHEEMHKGNMIHGDDDGNSKSGLAKVNGELLSTSVGEPGAKLDEKENIDEWMLRQGNLWPETDDSVDQEKAMKEPLSRKVAIPSGKLSPYRMMVVARFLLLLLFFQYRIFHPVPDAVGLWFISVTCEIWLALSWMIDQIPKWFPIDRETYLDRLSIRFEQENKPNMLSPIDIIVTTVDPIKEPPLVTANTVLSILALDYPADKISCYVSDDGASMLTFEALQETAEFSRKWVPFCKKFSIEPRAPEKYFSDKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNPKDHPSMIQVLLPHNVGSELPCLVYTSREKRPAFQHHGKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRHDRYANKNTVLFDINLRCLDGLQGPAYVGSACIFRRKSLTGCDSPVSSKRPSMVQVHSKQDENGEEASITAAATDEEKELLKSQKNDENKFEKSTHTMNSSLTEEGGVDPSSSQEVLLKEAIHVMGSKYEDRTLWGYEMGLSYGSIAADTLTSLKMHCHGWRSVYCMPKRDPFRGTAPINLTDRLNQVLRWAVGSLQILFSHHCPLLYDLNSGRLKGLQRIAYINSTVYPFSSIPLLIYCIVPAICLLTDKFITPSVGTFASLVFTALFISIFASAILELRWSGVGLEEWWRSQQFWVIGSVSANLFAVVQSIMGALPLGRVNTNFSIVSKAPDDVEFRELYTIRWTALLIPPTTIIIINLIGIVAGFTDSINSGEHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00791 975 MobiDBLite consensus disorder prediction 602 634 - -
Viun9g00791 975 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Viun9g00791 975 Coils Coil 379 399 - -
Viun9g00791 975 SUPERFAMILY Nucleotide-diphospho-sugar transferases 281 777 IPR029044 -
Viun9g00791 975 SUPERFAMILY RING/U-box 22 107 - -
Viun9g00791 975 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 185 942 - -
Viun9g00791 975 FunFam Cellulose synthase 19 110 - -
Viun9g00791 975 CDD mRING-HC-C4C4_CesA 35 85 - -
Viun9g00791 975 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Viun9g00791 975 MobiDBLite consensus disorder prediction 602 618 - -
Viun9g00791 975 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 269 377 IPR029044 -
Viun9g00791 975 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 433 568 IPR029044 -
Viun9g00791 975 Pfam Cellulose synthase 281 969 IPR005150 GO:0016020|GO:0016760|GO:0030244
Viun9g00791 975 MobiDBLite consensus disorder prediction 619 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00791 Viun-Chr9 5884313 5889503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00791 1 975 Cell Wall Biosynthesis AT5G17420 62.500 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00791 K10999 - gmx:100777270 1782.3