Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00767 ATGATCATGGCCGAGAAAACCAACGGCGGCGAGGCTAATAACCCCATGCTGCTCCACGGGAAGTACGAGCTGGGGCGGCTACTGGGGCACGGTACGTTCGCCAAGGTGTACCACGCGCGGAACCTCAAGAGCGGAAAGAGCGTGGCGATGAAGGTGGTGGGGAAGGAGAAATTAATAAAGGTGGGGATGATGGAGCAGATCAAAAGGGAGATCTCGGCCATGAACATGGTCAAGCACCCCAGCATCGTGCAGCTCCACGAGGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGCGAGCTCTTTAACAAGATCGCCCGCGGCCGTCTCAGGGAGGAGACCGCGCGCCTCTACTTCCAGCAGCTCGTCTCCGCCGTCGACTTCTGCCATAGCCGTGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCCTCGACGAGGACGGCAACCTCAAAGTCACCGACTTTGGCCTCAGCACCTTCTCCGAGCACCTCCGCCAGGACGGCCTGCTTCACACAACGTGCGGCACCCCGGCCTACGTGGCGCCGGAGGTCATCGGGAAAAAGGGCTACGACGGCGCCAAGGCTGATATCTGGTCTTGCGGTGTAATCCTCTATGTACTCCTCGCAGGGTTTTTACCCTTCCAGGATGACAACCTTGTCGCCTTGTATAAGAAAATCTACCGCGGTGACTTCAAGTGCCCGCCGTGGTTTTCATCCGAGGCACGCCGCCTCATTACGAAGCTCCTCGACCCGAACCCGAATAACCGAATAACGATTTCGAAGATCATGGAGTCGTCCTGGTTTAAAAAACCGGTTCCGAAGAACGTGATGGGAGCGAAGAGAGAAGAGTTGGATTTGGAGGAGAAGATTAAGCAGCAGGAAGAATGCAAGTCCACGACGATGAATGCTTTTCATATAATTTCGCTTTCGGAGGGGTTCGATTTGTCGCCCTTGTTCGAGGAGAAGAAGAGGGAGGAGAAGGAGATTCGGTTTGCGACCACACGCCCCGCGAGTAGCGTGATTTCGCGGCTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTTAAGAAAAGCGAGACCAAAGTGAGGTTGCAGGGTCAAGAGCGGGGTCGGAAAGGGAAGCTTGCAATTGCTGCGGATTTATACGCCGTGACGCCGTCGTTTTTGGTGGTGGAGGTGAAGAAGGACAACGGTGATACCTTAGAGTACAACCAGTTCTGCAGCAACCAACTTCGTCCTGCGCTTAAAGACATCGTGTGGAGGACTTCTCCTTCTGAGAATCCTACACCTGCTTGA 1320 0.5598 MIMAEKTNGGEANNPMLLHGKYELGRLLGHGTFAKVYHARNLKSGKSVAMKVVGKEKLIKVGMMEQIKREISAMNMVKHPSIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLVSAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNNRITISKIMESSWFKKPVPKNVMGAKREELDLEEKIKQQEECKSTTMNAFHIISLSEGFDLSPLFEEKKREEKEIRFATTRPASSVISRLEEVAKAVKFDVKKSETKVRLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSNQLRPALKDIVWRTSPSENPTPA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00767 439 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Viun9g00767 439 Gene3D Phosphorylase Kinase; domain 1 19 103 - -
Viun9g00767 439 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00767 439 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Viun9g00767 439 Gene3D Transferase(Phosphotransferase) domain 1 104 281 - -
Viun9g00767 439 FunFam Non-specific serine/threonine protein kinase 12 308 - -
Viun9g00767 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 424 - -
Viun9g00767 439 Pfam NAF domain 307 365 IPR004041 GO:0007165
Viun9g00767 439 CDD STKc_SnRK3 21 275 - -
Viun9g00767 439 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00767 439 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Viun9g00767 439 CDD CIPK_C 310 424 - -
Viun9g00767 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Viun9g00767 439 Gene3D Kinase associated domain 1, KA1 304 429 - -
Viun9g00767 439 SUPERFAMILY Protein kinase-like (PK-like) 19 277 IPR011009 -
Viun9g00767 439 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00767 439 FunFam Non-specific serine/threonine protein kinase 304 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00767 Viun-Chr9 5674864 5676933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00767 7 433 CBL-interacting serine-threonine protein kinases AT4G30960 72.998 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun9g00767 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00767 - K07198 gmx:547644 808.135