Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00760 ATGCATCAGGGTGATCAAATTGTTCTAAGCTTGAGGCCTGGCGGTGGTCGTGGCGGCGGAAGCAGGCTTTTTCCTCTCTCCACCTCATCCTCCTCCCCTTTCCCTCCCTCCGCCGATCTCCCTCTCTCGCGCCCCCATGAGTCCTTCTCTCTCAAGACTGGAGATTCACGTTTTGAGGTTCGTGAGCGCGTGCAATATACCAGAGATCAGCTTTTACAGCTTCACAAGGCTGTTGAAGTCCTTGATGATATTCTGAAAATTAAGCAAGATATAGTAGCTGAACTTTTTGGTGAAAATCAAAGTTGGGGCGGCCGAGCTGAAAGCAATCTTCCTCATCAACTACCAAACCGGCATTCTGAGTTAGACAATCGTGATTGGCGAGGTCGTTCTGGACAACTTCCTGCTAGTCAAGATGAGAAGTCTTGGGAAAACCTCAGAGATAACAGTAGTCAGATTAATCGCCAATACCATCTTAATTCCCAGTTTGCAAGGACACAGATATCTTCTACCCAAGGGGGAGGACCTACTCCTACACTTGCTAAGGCTGAGGTTCCTTGGTCAGCCAGAAGGGGAAGTCTATCTGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAATAAGTTAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCTGCTGACATCTTGAAGGATGTCATTTCACTTATTTTTGACAAGGCTGTTCTTGAACCAACATTTTGCCCAATGTATGCTCAGCTGTGTTATGATCTGAATGAAAAACTGCCTCCATTCCCATCTGGGGAACCTGATGGGAAGGAAATCACCTTTAAGCGAGTATTATTGAATAATTGCCAGGAGGCATTTGAAGGTGTAGACCTAAAAAGGATGGCTGCCCCTGAGCAGGAGACGGACCATATGGACAAGGAAAGACTGCTCAAGCTTCGGACGCTTGGAAATATCCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTCCCTGAAAGGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCCCAAGACAGCATGTCTTGTCCCGTCGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAACACTATTGGCAAGCAGCTTGATGAGAGTCCTAAATCGCGGCGTATAAATGATATTTACTTTAATCGATTGAAAGAATTGAGCTCAAATCTTCAACTTATACCCCGGATTAGGTTCATGATTCGGGATGTTCTAGAGTTACGCTCCAATAAATGGGTGCCTAGACGGGAAGAGATCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGTTTGCGACCAGGTGCCACTGCAAGTATGAGAAATAACCGTGGCGGTGTTCAAGGAAATTTCGGCCCTGGGGGCTTCCCTATTGCCCGACCCGGTACAGGGGGTTTGATGCCTGGAATGCCAGGGGCCAGGAAGATGCCTGGGATGCCTGGATTTGATAATAACAACTGGGAGATGCCTAAGACTAGATCTATGCCAAGAGGAGACTTCTCAGGTGTTCAAGCTGCTGGATCCAGCAGCCCTTTACTTTCCAAGACCACAGTCCTTAATTCAAAATTGCTACCTCAAGGGAGTAGTGGGACTATAAGTGGAAGAAATAGTGCCCTAGTACATGGAGCTGCTACAGTTTCTGCTCCACCGGCAAACATCAGTTTGGCCCATGAGACAACACCTCAGCTCTCTTCACATGATAGAACAGTTGCTCCTGTTCCTGTGTCCTCTGAGAAGCCACAAGCACCTGCCGGTGGATTGAATACCAATGATCTTCGCCGCAGAACTATCTCTCTTCTAGAAGAATATTTCAGTGTTCGAATTTTGGAAGAGGCATTACAGTGTGTGGAGGAACTGAAATCTCCTTCTTATCACCCTGAGGTTGTTAAGGAAGCCATTAATCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAATCTCATGGAGTATCTATACATTAAGAAGATTCTTACTGCTATAGATATTGAGGCCGGCTTTTTGTTATTCGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAAGCACCTAGTAATTTTGGTGTGATAATTGGGAAACTAATTTTGATTGGGGGATTAGATTTTAAGGTGGTGAGAGAGATTCTGAAGAAGGTGGAAGATGACATGTTCCAGAGAGCAATATTTGACAGTGCGGTAGGGACCATTAAATCTGCTGCATCCGGACAATCAGTGTTGGATTTACAAACATCTGATATTGAGGCCTGTCAGAGTCTGCTCAAGTGA 2319 0.4498 MHQGDQIVLSLRPGGGRGGGSRLFPLSTSSSSPFPPSADLPLSRPHESFSLKTGDSRFEVRERVQYTRDQLLQLHKAVEVLDDILKIKQDIVAELFGENQSWGGRAESNLPHQLPNRHSELDNRDWRGRSGQLPASQDEKSWENLRDNSSQINRQYHLNSQFARTQISSTQGGGPTPTLAKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCYDLNEKLPPFPSGEPDGKEITFKRVLLNNCQEAFEGVDLKRMAAPEQETDHMDKERLLKLRTLGNIRLIGELLKQKMVPERIVHHIVQELLGPQDSMSCPVEENVEAICQFFNTIGKQLDESPKSRRINDIYFNRLKELSSNLQLIPRIRFMIRDVLELRSNKWVPRREEIKAKTITEIHSEAEKNLGLRPGATASMRNNRGGVQGNFGPGGFPIARPGTGGLMPGMPGARKMPGMPGFDNNNWEMPKTRSMPRGDFSGVQAAGSSSPLLSKTTVLNSKLLPQGSSGTISGRNSALVHGAATVSAPPANISLAHETTPQLSSHDRTVAPVPVSSEKPQAPAGGLNTNDLRRRTISLLEEYFSVRILEEALQCVEELKSPSYHPEVVKEAINLALDKSPPCVEPVANLMEYLYIKKILTAIDIEAGFLLFGSLLDDIGIDLPKAPSNFGVIIGKLILIGGLDFKVVREILKKVEDDMFQRAIFDSAVGTIKSAASGQSVLDLQTSDIEACQSLLK 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00760 772 FunFam Eukaryotic translation initiation factor isoform 4G-2 191 422 - -
Viun9g00760 772 Pfam MA3 domain 607 718 IPR003891 -
Viun9g00760 772 MobiDBLite consensus disorder prediction 1 49 - -
Viun9g00760 772 MobiDBLite consensus disorder prediction 574 604 - -
Viun9g00760 772 ProSiteProfiles MI domain profile. 606 728 IPR003891 -
Viun9g00760 772 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 52 768 IPR045208 GO:0003743
Viun9g00760 772 SUPERFAMILY ARM repeat 601 758 IPR016024 -
Viun9g00760 772 Gene3D - 601 769 - -
Viun9g00760 772 MobiDBLite consensus disorder prediction 102 143 - -
Viun9g00760 772 MobiDBLite consensus disorder prediction 102 116 - -
Viun9g00760 772 SMART ma3_7 607 719 IPR003891 -
Viun9g00760 772 FunFam Eukaryotic translation initiation factor isoform 4G-2 600 762 - -
Viun9g00760 772 Gene3D - 191 422 - -
Viun9g00760 772 MobiDBLite consensus disorder prediction 23 37 - -
Viun9g00760 772 SUPERFAMILY ARM repeat 194 424 IPR016024 -
Viun9g00760 772 SMART if4_15 200 421 IPR003890 GO:0003723|GO:0005515
Viun9g00760 772 Pfam MIF4G domain 200 421 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00760 Viun-Chr9 5593970 5599311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00760 1 770 Eukaryotic Initiation Factors Gene Family AT5G57870 61.820 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00760 K03260 - gmx:100800438 1197.96