Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00745 ATGAAGCATTTTTCTCTCATCATTCATGCATTCTGTTATATATTTGTCCACTTGATTTCTCTCTTTGCATTGAAGCTATTGCTTAGCACAAACATGTTTGTCTCTGCATCAGGCAACCATACTGATCATTTGGCACTACTCAAATTCAAAGAATCCATATCAAGTGATCCTTATGAAGTTCTGCTATCATGGAATAGTTCTACTCACTTCTGTAATTGGCATGGAATCACATGCAATTCCATGCACAAAAGAGTTACAAAGTTAGACTTGGCAGGGTACAAGTTGAAGGGATCCATATCTCCTCACCTAGGAAATCTCTCTTACATGACAATCTTCTACCTTGACAACAACAATCTGTACGGAGACATCCCACAAGAACTGGGAAAATTGTCACAAATGGAGGAACTCTCTGTGGGAAACAACTCATTGGTAGGAGAAATTCCTACAAACTTGACATATTGCACTAATCTCAAAGTCCTATACTTATTTGGGAACAATCTGATTGGAAGAATACCAACAGAAATTAGCTACCTTCACAGGCTTCAAAATTTGAATGTTGGGAGCAATAAGTTAACAGGACGAATCCCATCGTTTCTTGGGAATCTTTCTGCTCTACATCGTCTCTCAGTGGGTATTAACAACTTAGAGGGAGAAGTTCCACATGAATTGTGTCACCTAAAAGACCTGGTACAGATATTTGTACCAGTCAACAATTTGATTGGTACATTTCCTTCTTGCTTATACAACATCTCATCTCTGACTGTGATCTCAGCTACAGCAAATCAGTTTACTGGATCTCTTCCATCCAACATGTTCCACACTCTCCCCAATCTCCAACAATTTTACATCGCTCTAAATCAAGTCTCAGGTACAATCCCACCTTCCATTTCAAATGCATCTACCCTTTCACTACTTGAGATAGCTGCAAATCAATTCACAGGACAAGTTCCAGATTTGGAAAAACTACAAGATCTTTTTTATCTAGGTTTGTCTCAAAACAATCTAGGTGACAATTCAACTAATGATTTGAAGTTTCTTAAATCATTGACAAATTGTAGTAGTTTGCAAATGTTGGATATATCTTACAATAATTTTGGAGGTCAATTGCCAAATTCTTTAGCCAATTTCTCCACCCAACTCAATCAGCTGTATCTTACAAGTAATAAGATATCAGGAGATATTCCTACAACAATGGGAAATCTGATTGGCTTGACTCAATTGATGATGGGATATAATCGCTTCAGTGGGAGTATTCCATCAACTTTTGGAAAGTTTCAAAACATGCAAAAGTTAGTGTTAAGAGCAAACCAGTTGTCAGGACATATAGGAGACTTTGTTGGCAACCTTAGTCAATTGTATTTTTTGGATATGACAAGAAATATGTTGGAAGGAAATATACCTTCGAGTATACGAAATTGTCAAAAGTTACAATATCTGTGTCTTTCACAAAACAATTTGACAGGAAGCATACCTTTAGAGATCTTTAATCTCTCCTCTTTGTCAATCTTGTTGAAATTGTCACAAAACTCATTGAGTGGCAATATACCAAAAGAAGTGGGAAAGCTGAAAAATGTTAATCATCTAGATGTGTCTGAGAATCTTTTGTCTGGTCACATTCCTGAAACTATTGGAGAATGCATAACATTAGAGTACCTCTATTTGCAAGGAAATTCTTTACAGGGAAGCATACCATCTTCTTTAGCATCACTCAAAGGCCTTCAACGTTTAGATCTGTCACGAAACAATTTATCAGGATCAATCCCTACTGGTTTGCAGAACATTTCTTTCTTAGAATATTTCAATGTATCCTTCAACATGTTGGATGGTGAAGTTCCAACTGAAGGTGTGTTTCAGAATGCAAGCGGCTTTGTGGTGAATGGAAATAATAACCTCTGTGGAGGTATTTCCAAACTGCATCTACCACCATGCCCTTTCAAAGGTAAGAAACTTCAAAAACACCACAAGTCTAGGTTGATAACAGTGACAGTTAGTGTGGTTGTTTTTCTTCTCATATTGTCAATTATTCTAACTATCTACTGGATGAGAAAAAACAAAAACAAACCATCTCTGGAATCAACAACGATTGACCAACTAGCTAAAGTTTCATACCAAAGCCTACACAACGGAACTGATGGGTTCTCAGCAACAAATTTGATTGGCTCTGGAAATTTTAGCTCTGTCTATAAAGGAACTCTTGAGTTTGAAGACAAAGTTGTTGCTATAAAGGTCCTAAATCTTCAAAAAAAAGGATCCCACAAGACTTTCATAGCTGAATGCAACGCACTCAAAAGTATTAAACATCGAAATCTGGCTAAGATTTTAACATGTTGTTCAAGTACAGATTACAAAGGTCAAGAGTTTAAAGCTTTAATTTTTGAGTACATGAAAAATGGAAGCTTAGAACAATGGCTACATCCGAGGACACAAGGTCTGGAACAACATCAAAGATTATTAAACCTCGGTCAAAGATTAAATATCATCACTGATGTTGCTTCTGCAATACATTATCTTCATCATGAATGTGAGCAATCGATTATTCATTGTGATTTAAAGCCAAGCAATGTTCTTCTGGATGATGACATGGTTGCTCATGTGTCTGATTTTGGCATAGCAAGAATTCTCACAACTATTAATGGTACTGATAAGCAAACGAGTACAATTGAGTTCAAAGGGACAATTGGTTATGCTCCCCCTGAGTATGGAATGGGTTCTGAGGTGTCTATGAATGGTGACATGTACAGTTTTGGGATCCTTTTATTGGAAATGTTTACTGGAAGAAGACCCACGGAAGAAATGTTTACAAATGGTCAAACTTTGCATAAATTTGTGGAAAATTCATTGTTTGAAAATCTCTTACAAATTTTGGACCCATCACTTATACCGAAGCATGAAGGAGAAACAACAGAAGAAGAGAACAGTCAAAATCTTAGTGCAGATGATGAAAACTACTTAGTTTCAGTCTTTAAGATTGGACTTGCTTGCTCAATGGAATCACCTAAAGAAAGAATGGATATTATGGATGTCACAAAAGAACTAAGCAAAATCAGAAAAGCATGGTATGATTCTCTTTGTATTAATAGGGAAAATGTCATTGTGTCTTATTCTTCCAAAAATTAA 3117 0.3632 MKHFSLIIHAFCYIFVHLISLFALKLLLSTNMFVSASGNHTDHLALLKFKESISSDPYEVLLSWNSSTHFCNWHGITCNSMHKRVTKLDLAGYKLKGSISPHLGNLSYMTIFYLDNNNLYGDIPQELGKLSQMEELSVGNNSLVGEIPTNLTYCTNLKVLYLFGNNLIGRIPTEISYLHRLQNLNVGSNKLTGRIPSFLGNLSALHRLSVGINNLEGEVPHELCHLKDLVQIFVPVNNLIGTFPSCLYNISSLTVISATANQFTGSLPSNMFHTLPNLQQFYIALNQVSGTIPPSISNASTLSLLEIAANQFTGQVPDLEKLQDLFYLGLSQNNLGDNSTNDLKFLKSLTNCSSLQMLDISYNNFGGQLPNSLANFSTQLNQLYLTSNKISGDIPTTMGNLIGLTQLMMGYNRFSGSIPSTFGKFQNMQKLVLRANQLSGHIGDFVGNLSQLYFLDMTRNMLEGNIPSSIRNCQKLQYLCLSQNNLTGSIPLEIFNLSSLSILLKLSQNSLSGNIPKEVGKLKNVNHLDVSENLLSGHIPETIGECITLEYLYLQGNSLQGSIPSSLASLKGLQRLDLSRNNLSGSIPTGLQNISFLEYFNVSFNMLDGEVPTEGVFQNASGFVVNGNNNLCGGISKLHLPPCPFKGKKLQKHHKSRLITVTVSVVVFLLILSIILTIYWMRKNKNKPSLESTTIDQLAKVSYQSLHNGTDGFSATNLIGSGNFSSVYKGTLEFEDKVVAIKVLNLQKKGSHKTFIAECNALKSIKHRNLAKILTCCSSTDYKGQEFKALIFEYMKNGSLEQWLHPRTQGLEQHQRLLNLGQRLNIITDVASAIHYLHHECEQSIIHCDLKPSNVLLDDDMVAHVSDFGIARILTTINGTDKQTSTIEFKGTIGYAPPEYGMGSEVSMNGDMYSFGILLLEMFTGRRPTEEMFTNGQTLHKFVENSLFENLLQILDPSLIPKHEGETTEEENSQNLSADDENYLVSVFKIGLACSMESPKERMDIMDVTKELSKIRKAWYDSLCINRENVIVSYSSKN 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00745 1038 SUPERFAMILY L domain-like 378 633 - -
Viun9g00745 1038 FunFam LRR receptor-like serine/threonine-protein kinase EFR 345 649 - -
Viun9g00745 1038 ProSiteProfiles Protein kinase domain profile. 713 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00745 1038 Gene3D Ribonuclease Inhibitor 41 151 IPR032675 -
Viun9g00745 1038 Pfam Protein kinase domain 716 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00745 1038 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Viun9g00745 1038 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 1013 - -
Viun9g00745 1038 SUPERFAMILY L domain-like 39 335 - -
Viun9g00745 1038 Gene3D Phosphorylase Kinase; domain 1 693 794 - -
Viun9g00745 1038 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 794 - -
Viun9g00745 1038 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 78 344 - -
Viun9g00745 1038 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Viun9g00745 1038 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Viun9g00745 1038 SUPERFAMILY Protein kinase-like (PK-like) 686 1012 IPR011009 -
Viun9g00745 1038 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1023 - -
Viun9g00745 1038 Pfam Leucine Rich Repeat 354 376 IPR001611 GO:0005515
Viun9g00745 1038 Gene3D Ribonuclease Inhibitor 249 644 IPR032675 -
Viun9g00745 1038 Gene3D Transferase(Phosphotransferase) domain 1 795 1032 - -
Viun9g00745 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Viun9g00745 1038 SMART serkin_6 713 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00745 1038 Gene3D Ribonuclease Inhibitor 152 234 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00745 Viun-Chr9 5448333 5451706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00745 26 1022 Receptor kinase-like Gene Family AT3G47570 44.940 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun9g00745 Pkinase 4.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00745 - - gmx:100782685 1462.2