Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g00723 | ATGGCTGGAATGCTTCCAGGAGTTGAATGTGCAAGAAGGAGAAGATTCCATAGTTGCTTCGATTCAAACTCAACTTCTTTAGCATCACATGTATCCACAAGGCGCTCTTCTTTTGGTTTGTATGCAAGTAACTTTTCCTTGTCCACTTCACAGCAAAGAGGCATGTTATACCAGACACACCCAGATGAGGATATGGCAGGAGCTGCCAGAGAAGCCAGACAGAGATTGGATGACAAGTTTAGAGCACAAAGAATGTCTGATAACAAAAGGCAGAAGAGTACAACATGTGTGGAGGGTGGAAGAACAAGCATAACAGAGTTGCACACAGAGGTTTATGGGTCAAAGAAAAGTGGTGGAAGGAAATTCAGTTGGAGTAGATGGAGCTGGAAGGCCTCTGAACAAGAGGATTGTGCCGTGTGCTTGGAATCATTCAGGGTTGGAGAGACACTGATCCATCTTCCTTGTGCACATAAGTTTCATGACAGATGCTTGAAACCATGGTTGGAAAATAATTCTCATTGTCCATGTTGCAGAACAACCATTCTTTCCCTCTCCATTTAA | 561 | 0.4349 | MAGMLPGVECARRRRFHSCFDSNSTSLASHVSTRRSSFGLYASNFSLSTSQQRGMLYQTHPDEDMAGAAREARQRLDDKFRAQRMSDNKRQKSTTCVEGGRTSITELHTEVYGSKKSGGRKFSWSRWSWKASEQEDCAVCLESFRVGETLIHLPCAHKFHDRCLKPWLENNSHCPCCRTTILSLSI | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g00723 | 186 | SMART | ring_2 | 137 | 177 | IPR001841 | - | |
Viun9g00723 | 186 | PANTHER | SI:CH211-59O9.10 | 11 | 183 | - | - | |
Viun9g00723 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 178 | IPR001841 | - | |
Viun9g00723 | 186 | Pfam | Ring finger domain | 136 | 178 | IPR001841 | - | |
Viun9g00723 | 186 | CDD | RING-H2_PA-TM-RING | 136 | 178 | - | - | |
Viun9g00723 | 186 | SUPERFAMILY | RING/U-box | 124 | 182 | - | - | |
Viun9g00723 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 183 | IPR013083 | - | |
Viun9g00723 | 186 | FunFam | Zinc finger family protein | 111 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g00723 | Viun-Chr9 | 5363082 | 5364591 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g00723 | 1 | 81 | C3H Transcription Factor Family | AT2G15580 | 48.421 | 1.63e-18 | 75.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g00723 | - | - | gmx:100527583 | 322.013 |