Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g00720 | ATGGCCTTTGCATTGTCACCTTTTGCTCGCCACCCACATGGACAAAAAGGATCTTTTTTCAGAACTTCAACTCCTGACACCACAGATACCACTGTCCAAACTTCCTTTCCTCTAGAAAGCATTTATGAGGACCAGGTGATTGCAGACAAGAAACAAAATCAGATGAATTTGGCTACGGCTCTTCGGTCTGGAGAGTGGTCTGACATAGGAGAACGCCCTTACATGGAGGACACTCACATATGCATTGGAGATTTGGCAAAGAAATTTAATTATAATGCACCTTCTGGGGAAGCTGTTTCCTTTTATGGTGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTACGTGATAATCTGCCAAGATTTATTGTTGAGGATGTTAACTTTCCTTTGGAGCTTGAGAAAGTGGTCAAAAGGTCATTTTTGGAGACTGACACTGCATTCCTAAAATCATCTTCTCAGGAACCTTCCCTTTCTTCTGGTACAACTGCTTTAACTGCAATTATATTTGGAAGGTCTTTACTTGTGGCTAATGTGGGAGACTGTCGAGCTGTCTTGTCCCGCCATGGAAGGGCCATAGAAATGTCTAAAGATCATAGGCCAAACTGTGTGAATGAAAGGACACGGGTTGAGTCTCTAGGTGGCTTCATTGACGATGGTTACCTGAATGGGCAGTTAGGTATAACTCGCGCTATTGGAGACTGGCACCTGGAAGGAATGAAGGGAACGAGTGAAAGAGAAGGGCCATTGAGTGCTGAACCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGACGGAATATGGGATGTTTTTAGTAGCCAAAATGCTGTGGATTTTGCTAGGAGGAGGCTACAAGAGCACAATGATGAGAAACTATGCTGCAAGGAAATAGTGCAGGAAGCAATCAAGAGAGAATCAACTGATAACTTGACAGTTGTGATGGTATGTTTCAACTCAGATCCTCCAACACCTGTGGTTGTGGAAAGAACACGAGTAAGAAGAAGCATATCTGCAGAAGGACTTCAGAATCTACGATCCCTGCTAAAAGAATAA | 1083 | 0.4266 | MAFALSPFARHPHGQKGSFFRTSTPDTTDTTVQTSFPLESIYEDQVIADKKQNQMNLATALRSGEWSDIGERPYMEDTHICIGDLAKKFNYNAPSGEAVSFYGVFDGHGGKSAAQFVRDNLPRFIVEDVNFPLELEKVVKRSFLETDTAFLKSSSQEPSLSSGTTALTAIIFGRSLLVANVGDCRAVLSRHGRAIEMSKDHRPNCVNERTRVESLGGFIDDGYLNGQLGITRAIGDWHLEGMKGTSEREGPLSAEPELKLMTLTKEDEFLIIASDGIWDVFSSQNAVDFARRRLQEHNDEKLCCKEIVQEAIKRESTDNLTVVMVCFNSDPPTPVVVERTRVRRSISAEGLQNLRSLLKE | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g00720 | 360 | FunFam | Probable protein phosphatase 2C 22 | 46 | 330 | - | - | |
Viun9g00720 | 360 | CDD | PP2Cc | 62 | 327 | IPR001932 | - | |
Viun9g00720 | 360 | PANTHER | PROTEIN PHOSPHATASE 2C | 49 | 325 | IPR015655 | GO:0004722|GO:0006470 | |
Viun9g00720 | 360 | MobiDBLite | consensus disorder prediction | 13 | 32 | - | - | |
Viun9g00720 | 360 | Coils | Coil | 348 | 360 | - | - | |
Viun9g00720 | 360 | Pfam | Protein phosphatase 2C | 74 | 319 | IPR001932 | - | |
Viun9g00720 | 360 | ProSitePatterns | PPM-type phosphatase domain signature. | 101 | 109 | IPR000222 | GO:0043169 | |
Viun9g00720 | 360 | MobiDBLite | consensus disorder prediction | 17 | 32 | - | - | |
Viun9g00720 | 360 | SUPERFAMILY | PP2C-like | 57 | 329 | IPR036457 | - | |
Viun9g00720 | 360 | ProSiteProfiles | PPM-type phosphatase domain profile. | 62 | 327 | IPR001932 | - | |
Viun9g00720 | 360 | SMART | PP2C_4 | 52 | 325 | IPR001932 | - | |
Viun9g00720 | 360 | Gene3D | - | 43 | 331 | IPR036457 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g00720 | Viun-Chr9 | 5345600 | 5348941 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g00720 | 21 | 358 | PP2C-type Phosphatase Gene Family | AT2G25620 | 53.936 | 1.36e-130 | 377 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | DBP | Viun9g00720 | PP2C | 5.2e-70 | CL0238 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g00720 | K14803 | - | gmx:100813157 | 583.178 |