Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00715 ATGGCTGAACGGACAGAGAAGGGTTTTCTGAAGCAACTGAAAGTGTTTCCAAGCTCTAAGAAAGGTGGGAAGGGAAAGAGGTCAGGGAGAGCCGAGAATTGTTTTCGGAAGTCAATTGGGCTTGGACTCAAGACTCCCAAAGATGCCATTGAAGAAAAAATGGTCAGGACTAGAGGAAGACACGGTAAACTTGTCCGACGTGATCAACGTAAGCGTGGGGTTCCCATATCTATGCATGGTGATTTAGCAGTAGAGCTTGGAAATATCTCTTATGGTAATGTGTTATCCAGGCATACTGCTAGTAGTGGCCAGCATCCACCCCATCTTCCTCATTCCTCCATTCCCTCTTCGTCCACCCCCTCTCCGTCCACTCCCTCCTCATCCACCCCTTCTCCACCAACTTCCTCTTCAAATACCCCTTCACAACTCACTCCCTCTTCATCTACCCCCTCTTTCTCTACTGATCAAAGACATGTTTTTCAATCGTCTTTGCGTTCTATGCCATTGCCTCATCATACATCTACGTCAGTACTTCATCACACCACTTATCCACCACTACATCCCACTACTTATCCACCACTACATCCCAATTTTCCCCAAACAGTACCGCCAGTACTGCCCTCTTCTGCCCCGAAAGTCCACGACACTCGTCGTACCATAGTCCAATCCTTTTCTCCTACAGTCCACTTCCCCTTTCATCCCTTAGTCCAAGTTCCCTCTACTCCCTTAGGCCAAACCTCCTTTGCTCTCCCAGTCGAGCCCCCCCATGATGATGTAGTCCAGCACACCCCAGCTACTTCAAACCACCATGTCCTTCCTGAGGAGGTGCCTCGTGATGCTAGTGGGAGGGTTATCATAAGACCCGTGGGTAAAGGTTGGACACCTAACCGTTATGCAGTTGAGGCCATTGGTCATGCAATTAGGTCACAATTCGGAGGTCCCTACCACCATTATGAGGCTATGCCTGAGGACGCCCAACTTAAATGGTGGACTAAATTTAAGGCTAGAGTGACTTGGGCCCCTCAAGATGAGTGGCAAATTAGAAAAGTCTATGAGTCAAAAGTTAGAAAACGCCTCTCTGATATGTTGACTAAAGCAAGGGTGAGAGGGAACAAACCTAGCTGGATTGGAGAACAAGCATGGAGTGCACTTTTGAACTATTGGGATTCTGAGAAGTTCAAAGAAAGATCATCCCGAAACAAAATCAATCGGTCTTCAGCTAGAGGTGGAGCGTTGCACTCGACGGGTCGAAAATCACACTTGGACATAGCATTGGCTCTAGAACGTAAATATGGTCGACCTGTAGAGCCGGATGAATTATTTCTAGCTACTCACACCAAGAAGAATGGGGGTTGGGTAGATGGTCGTGCCCGGGAGACTTATGAAACCTACCATGAGCGGTTGAGGGTCATCCAAGCAGAAAGTTTTGAAAGATCAACATCCGACCCCAAACAAATAAGTGCAGTAATAAAGATTCAATGTTGGAAGGATGTTGCTGGAGGCAAGAGTAAAGGTAGAGTTTATGGTACAGCAGATTTGGCTGCCAACATTCGTCACGGAGTCTCATCCCTCACTCAGCCATCCTTGTTAGCTGCTGCCACCAATCACATTGACCTCTCTGCTACCGATCACATTGACTATTCTGCTGAGAATGAACAACTTCGTCGACAAGTCACACAAGCAAACATAACTGCTCGTGAAGCAATGGAAAAGTGTGCAAAGTTGGAGGACACTATGCAGTTGCTTAAACAACAAATGGCGATGATGATGGAACGACGGGTTGAAGACATGTCAACAAGTATAACTTAG 1809 0.4704 MAERTEKGFLKQLKVFPSSKKGGKGKRSGRAENCFRKSIGLGLKTPKDAIEEKMVRTRGRHGKLVRRDQRKRGVPISMHGDLAVELGNISYGNVLSRHTASSGQHPPHLPHSSIPSSSTPSPSTPSSSTPSPPTSSSNTPSQLTPSSSTPSFSTDQRHVFQSSLRSMPLPHHTSTSVLHHTTYPPLHPTTYPPLHPNFPQTVPPVLPSSAPKVHDTRRTIVQSFSPTVHFPFHPLVQVPSTPLGQTSFALPVEPPHDDVVQHTPATSNHHVLPEEVPRDASGRVIIRPVGKGWTPNRYAVEAIGHAIRSQFGGPYHHYEAMPEDAQLKWWTKFKARVTWAPQDEWQIRKVYESKVRKRLSDMLTKARVRGNKPSWIGEQAWSALLNYWDSEKFKERSSRNKINRSSARGGALHSTGRKSHLDIALALERKYGRPVEPDELFLATHTKKNGGWVDGRARETYETYHERLRVIQAESFERSTSDPKQISAVIKIQCWKDVAGGKSKGRVYGTADLAANIRHGVSSLTQPSLLAAATNHIDLSATDHIDYSAENEQLRRQVTQANITAREAMEKCAKLEDTMQLLKQQMAMMMERRVEDMSTSIT 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00715 602 Coils Coil 551 592 - -
Viun9g00715 602 Pfam Ribosomal_S17 N-terminal 4 54 IPR032440 -
Viun9g00715 602 MobiDBLite consensus disorder prediction 97 160 - -
Viun9g00715 602 Pfam Plant transposase (Ptta/En/Spm family) 378 512 IPR004252 -
Viun9g00715 602 Gene3D - 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00715 Viun-Chr9 5321925 5329757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00715 1 58 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 58.621 2.56e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00715 - - vun:114164025 1088.17