Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00694 ATGGGGAAGAAAAAGAATCAGGTAGGAGAAACAAGTGAAGGTAGAGGAGATCATAAGAAGACAGAAGATGAAAGCTCCAGATCATATGACAACGATACTTTGGCGTTTATATCAATGGCTCAAGAGTTGAAGGATGAAGGGAACAAGCTGTTTCAGAAGCGGGATGTTGAAGGGGCTTTGGCAAAGTATGAGAAGGCCATGAATTTGCTTCCAAGAAATCATGGAGATATTTCTTATTTGAGGAGTAACATGGCTGCGTGCTACATGCAGATGGGTCTTCGTGAGTATCCTAAAGCAATCAATGAATGCAATTTGGCTCTTGAAGTATCACCAAAATATAGTAAAGCTCTGATGAAGAGGGCAAGGTGCTATGAAGCTTTAAATAGGTTGGATTTTGCGCTGAGAGATGTTAGCACTGTTCTGAAGATAGAGCCAAATAATGTAATGGCATTGGAGGTCTCGGATAAGGTGAAGCAAGCTCTTGAAGTTAAGGGATTAGTAGTAAATGATACGGAAATTGAGTTGCCTCCAGACTATACCGGACCTCCTGATTTACGTCTGGAAAAAGTTGACAGAGAAAAGATTTACAGGAAGAAGAAAAGCAAAGAGAAGGTGAGGTCTACTGATAAAATTGAAGAAAAGCAAGCTGAGGAGAAATTAGAAGAGAATAAAGCTGAGGACAGTCGGAAAGATAAGAAGGCTAAGAAATATAAGAAGAAGAAGGCCAAGGAAAAAGATGTTGAGAAAAAAGATGATGTTAAGGAAGTTATTGAGGAAAAGAGTAACGGTAGAAGTGAAGATATACCTAAGAAAGCAGCAAAACTTGTTTTTGGTGAGGATATAAGATGGGCTGAATTGCCAGTTAATTGCAGCCTCTTTCAGCTTAGGGAAATTATTTGTGATCGTTTCCCTAGACTGGGAGCAGTTCTTGTCAAATATAAGGACCAAGAGGGTGATCTGGTCACTATCACTTCTGATGAAGAATTAAGGTGGGCTGAAACAGGATCACAGGGTTCTATACGGCTGTACATAGTGGAAGTTAATCCTGAACATGATCCATTCTTTGTGAAGCTTAATGCAAAGAGTGGAGAAAAGGTTAGTATTGCTAATTCTCCTGTGAATGGATCTGTTGTGAAGGCAAAGAACATTATTAGCTCATCTTGCATTGAGGATTGGATAATTCAGTTTGCACAACTGTTCAAGAACCATGTTGGGTTGGAAGCTGACAGATATTTACATTTTCATGAATTTGGTATGAAGCTCTATTCAGAGGTTGTGGAGGAGACAATTATAAGTGAGGAAGCTCAAGGCCTACTTGATGTTGCTGAAGGTAAGTTCCAAGAGATGGCAGCTCTAGCATTGTTGAATTGGGGAAATGTGCATATGTCCAGCGCAAGGAACAAAGTTTATTTTACTGGAGATTCTTCTAAGGAGCATTTGCATGAACAAATCAGAAGTTTGTATGAATGGGCACACGAAGAATATGAAAAAGCTGGGGAGAAGTATGAAACAGCCATTGAAATTAAACCAGATTTCTATGAAGGCTTCTTGGCCCTAGGCCAACAGCTGTTTGAGCAAGCCAAGCTTTCTTGGAATTATGCACTCTGTTCTAAGGTAGATTTATCAACATGGTCCTCCTCCACTGAGCTTCTTCAGCTTTACAACAGTGCTGAGGATAGTCTGGAGAAAGGAATGCTTATATGGGAAGAATCAGGAGAGCAGAAGTTGCTGGAAACTTCCAATCCGAAGGATACTTTATTACATTTAAAGGACATGGGGTTGGACCAACTATTCAAAAATATGTCAGCACATGAAATTGCTTCACAGGTGGCTGATACGAGGTCGCAAATGAATCTTCTGTGGGGTACCATACTATATGAGCGCTCAATTGTGGAATTCATGTTAGGGCTACCAGGATGGAATGAAAGTCTTGAAGTTGCAGCTGAGAAGTTTCAACTTGCTGGAATTTCTACAAAAGATATATCTGTAATGTTGAAGAATCACTGTTCAAATAACTTGGCTGTAGACGGTCTTGGATTCAACATTAATGAAATAGTCCGACCATGGAATGAGATGTACAACGCTAAAAAGTTGCAGAAAGGTGTTCCATCATACCGTTTGGAGCCCTTGTTTAGAAGAAGAGTATCTAAAACATTCCATGCCTTTGAGCTTGAATGA 2178 0.3994 MGKKKNQVGETSEGRGDHKKTEDESSRSYDNDTLAFISMAQELKDEGNKLFQKRDVEGALAKYEKAMNLLPRNHGDISYLRSNMAACYMQMGLREYPKAINECNLALEVSPKYSKALMKRARCYEALNRLDFALRDVSTVLKIEPNNVMALEVSDKVKQALEVKGLVVNDTEIELPPDYTGPPDLRLEKVDREKIYRKKKSKEKVRSTDKIEEKQAEEKLEENKAEDSRKDKKAKKYKKKKAKEKDVEKKDDVKEVIEEKSNGRSEDIPKKAAKLVFGEDIRWAELPVNCSLFQLREIICDRFPRLGAVLVKYKDQEGDLVTITSDEELRWAETGSQGSIRLYIVEVNPEHDPFFVKLNAKSGEKVSIANSPVNGSVVKAKNIISSSCIEDWIIQFAQLFKNHVGLEADRYLHFHEFGMKLYSEVVEETIISEEAQGLLDVAEGKFQEMAALALLNWGNVHMSSARNKVYFTGDSSKEHLHEQIRSLYEWAHEEYEKAGEKYETAIEIKPDFYEGFLALGQQLFEQAKLSWNYALCSKVDLSTWSSSTELLQLYNSAEDSLEKGMLIWEESGEQKLLETSNPKDTLLHLKDMGLDQLFKNMSAHEIASQVADTRSQMNLLWGTILYERSIVEFMLGLPGWNESLEVAAEKFQLAGISTKDISVMLKNHCSNNLAVDGLGFNINEIVRPWNEMYNAKKLQKGVPSYRLEPLFRRRVSKTFHAFELE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00694 725 MobiDBLite consensus disorder prediction 206 232 - -
Viun9g00694 725 Gene3D Tetratricopeptide repeat domain 37 165 IPR011990 GO:0005515
Viun9g00694 725 SUPERFAMILY CAD & PB1 domains 273 355 - -
Viun9g00694 725 ProSiteProfiles PB1 domain profile. 270 347 IPR000270 GO:0005515
Viun9g00694 725 Coils Coil 197 231 - -
Viun9g00694 725 CDD PB1 278 344 - -
Viun9g00694 725 PANTHER PROTEIN CLMP1 3 723 IPR044517 -
Viun9g00694 725 Gene3D - 267 346 - -
Viun9g00694 725 MobiDBLite consensus disorder prediction 1 29 - -
Viun9g00694 725 SUPERFAMILY TPR-like 40 528 IPR011990 GO:0005515
Viun9g00694 725 SMART PB1_new 270 347 IPR000270 GO:0005515
Viun9g00694 725 SMART tpr_5 40 73 IPR019734 GO:0005515
Viun9g00694 725 SMART tpr_5 114 147 IPR019734 GO:0005515
Viun9g00694 725 SMART tpr_5 78 113 IPR019734 GO:0005515
Viun9g00694 725 MobiDBLite consensus disorder prediction 206 241 - -
Viun9g00694 725 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Viun9g00694 725 Pfam PB1 domain 274 345 IPR000270 GO:0005515
Viun9g00694 725 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00694 Viun-Chr9 5081657 5089434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00694 21 147 Calmodulin-binding Proteins AT3G25230 32.624 3.69e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00694 K26538 - gmx:100820306 1080.86