Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00685 ATGACGTCACGTTCGGGTCAGGGCAGCAGCGGGAGCAGCAGGACCCGTGTGGGGAAGTATGAGTTGGGTCGGACCCTGGGTGAGGGCAATTTCGCCAAGGTAAAGTTCGCGAGACACGTGGAAACCAGAGAGAACGTCGCCATCAAGATTCTCGACAAGGAGAAAGTTCTCAAGCACAAAATGATTGACCAGGTGATGGCTAGCAGAACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGAGAGCTGTTTGATAAAATTGCACGCAGCGGGAGGTTGAAAGAAGATGAAGCAAGAAAATATTTTCAACAGCTTATATGTGCTGTGGATTACTGCCATAGCAGAGGTGTTTTTCATAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGTGGTACGCCAAATTATGTTGCTCCAGAGGTGATTAACAACAAAGGTTATGATGGTGCAAAGGCAGATCTGTGGTCATGTGGTGTTATTCTCTTTGTTTTAATGGCAGGCTATTTGCCCTTTGAAGAAACCAATCTAACGGCTTTATATAAAAAGATTTACAAGGCTGAGTTCACGTGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAACAGAATACTTGATCCAAATCCTGCCACTAGGATTACATTATCTGAGGTGGTTGAGAATGATTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGCCTAGTGTTAGTCTTGATGATGTAAATTGTATTTTCAGCGAATCTTTGGATTCTCAAAATCTCGTAGTTGAGAGGCGTGAAGAGGAGGGGCATGTGGCACCAGCAACAATGAATGCCTTTGAGCTTATATCTAAATCTCAAGGTCTCAACCTTAGTAGTCTGTTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACACGATTCACATCCAAATGTTCAGCAGATGAAATAATTTCAGAAATTGAGAAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTGGCCACCGAGATCTTAGAGGTAGCCCCTTCGCTATACATGGTTGAGCTGCGTAAGTCTCAAGGAGATACACTGGAATTTCACAAGTTCTACAAAAATCTTGCCACTGGGCTGAAAGACATTGTTTGGAAAGCAGAGCCTATCGATGGAGGAAAGGAAGGAGGAAAAGATGGAGGAAAAGATGGTGCTAAACCATCAAAATAA 1338 0.429 MTSRSGQGSSGSSRTRVGKYELGRTLGEGNFAKVKFARHVETRENVAIKILDKEKVLKHKMIDQVMASRTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLTALYKKIYKAEFTCPPWFSSSAKKLINRILDPNPATRITLSEVVENDWFKKGYKPPVFEQPSVSLDDVNCIFSESLDSQNLVVERREEEGHVAPATMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISEIEKAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSQGDTLEFHKFYKNLATGLKDIVWKAEPIDGGKEGGKDGGKDGAKPSK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00685 445 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Viun9g00685 445 SMART serkin_6 20 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00685 445 CDD CIPK_C 303 418 - -
Viun9g00685 445 Pfam NAF domain 299 359 IPR004041 GO:0007165
Viun9g00685 445 ProSiteProfiles Protein kinase domain profile. 20 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00685 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 407 - -
Viun9g00685 445 Pfam Protein kinase domain 64 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00685 445 Gene3D Phosphorylase Kinase; domain 1 9 68 - -
Viun9g00685 445 FunFam Non-specific serine/threonine protein kinase 79 261 - -
Viun9g00685 445 Gene3D Transferase(Phosphotransferase) domain 1 79 261 - -
Viun9g00685 445 Gene3D Kinase associated domain 1, KA1 296 422 - -
Viun9g00685 445 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Viun9g00685 445 FunFam Non-specific serine/threonine protein kinase 296 422 - -
Viun9g00685 445 MobiDBLite consensus disorder prediction 425 445 - -
Viun9g00685 445 SUPERFAMILY Protein kinase-like (PK-like) 17 273 IPR011009 -
Viun9g00685 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00685 Viun-Chr9 5020506 5028216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00685 66 437 CBL-interacting serine-threonine protein kinases AT1G30270 81.989 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun9g00685 Pkinase 3.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00685 - - gmx:100788746 776.548