Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00592 ATGCTCTTTTGGCTTCTTACGATTTCGTATTTTGCAATAAGTTTAAAATCAAAGGCTTTTCTCCGCTTTATATGTGCTTCATTTACTACCGATGTGAATACTACACAAAAATGCAGCGTTTGTTTTTTCAAAATTTGTCCCCATTTATTTTTTTCTGATTTGTTTGGCAGCAGCAAAATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACTTTTGTCTTTGGTTTGAAAGTGTGGGTACTAATGGGAATACTAGTTGGGTTATTCATTGTAATCATTCTTGTGGTGCTATCAATATGTCTCACTTTAAGAAAGAAATTCAGAAGAGTAAATGGCAAGCTTCCACTTAGCCATGTGTTAGCTATTTCAGAAGAGATCAAAGAAATCAGAGTTGATCAAGTTTCAGCAAATAATCATCCACAGAATGGTACTTTTATGAGTCTGAATGACAAATTTGGTGAAGGGGAGACTGAAAAGGTTATGAACCAAACACAGAATGGGGACAATAGTAGTCAATCAGGCTCCTTTAATCATGTAGAGAAAGATGGCAATGGCTCTCAATCAGGTGAAGAAAATGGTGCTAAGGGAATTGCTTCTTATAGGTCTTCTTTGCATCCTATAACCGCACCATCCCCTTTGTCTGGTTTGCCGGAATTCTCACAGCTTGGCTGGGGCCACTGGTTTACACTAAGGGACCTAGAACTTGCTACGAACAGATTTTCAAAAGAAAATGTTATTGGGGAAGGTGGATATGGAATTGTTTATCGTGGTCAATTAATCAATGGTAGTCCTGTGGCCATCAAGAAGCTCCTCAACAATTTAGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTACGGCATAAGAACTTAGTTCGACTTCTGGGCTACTGCATTGAAGGCACTCATAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAGTGGCTTCATGGGGCCATGCGGCAGCATGGTTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACAGCCAAAGCGCTGGCTTATTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATAGAGATATTAAGTCGAGCAACATTCTAATTGATGAGGACTTTAATGCCAAAATATCTGACTTTGGGCTGGCCAAGTTACTCGGTGCTGGAAAAAGTCATATTACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTTTACAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGTCGACCAGCAACCGAGGTAAATTTGGTGGACTGGCTCAAGATGATGGTAGGTTTTCGACGCTCAGAAGAGGTGTTGGATCCCAACATTGAGACCAGGCCATCGACAAGCGCCCTTAAACGAGCCCTCTTGACAGCTCTGAGGTGTGTTGATCCAGATGCAGAAAAAAGACCAAGAATGAGCCAAGTTGTCCGCATGCTTGAATCAGAGGAATATCCTATACCACGAGAGGATCGAAGACGGCGGAAGAGTCAGGCCGGAAACATGGAGGTGGAGACTCACTCTGATACAGATAAGAGTGACAATACAGATTACAAGTCCAATGGCAGAAGGAACCAATGTGTGTAG 1683 0.4171 MLFWLLTISYFAISLKSKAFLRFICASFTTDVNTTQKCSVCFFKICPHLFFSDLFGSSKMASDLNSGLSKKTFVFGLKVWVLMGILVGLFIVIILVVLSICLTLRKKFRRVNGKLPLSHVLAISEEIKEIRVDQVSANNHPQNGTFMSLNDKFGEGETEKVMNQTQNGDNSSQSGSFNHVEKDGNGSQSGEENGAKGIASYRSSLHPITAPSPLSGLPEFSQLGWGHWFTLRDLELATNRFSKENVIGEGGYGIVYRGQLINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPATEVNLVDWLKMMVGFRRSEEVLDPNIETRPSTSALKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRKSQAGNMEVETHSDTDKSDNTDYKSNGRRNQCV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00592 560 MobiDBLite consensus disorder prediction 160 195 - -
Viun9g00592 560 Pfam Protein kinase domain 242 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00592 560 MobiDBLite consensus disorder prediction 512 560 - -
Viun9g00592 560 ProSiteProfiles Protein kinase domain profile. 241 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00592 560 Gene3D Phosphorylase Kinase; domain 1 221 316 - -
Viun9g00592 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Viun9g00592 560 PANTHER OS01G0323000 PROTEIN 63 539 - -
Viun9g00592 560 Gene3D Transferase(Phosphotransferase) domain 1 317 529 - -
Viun9g00592 560 FunFam Putative receptor-like protein kinase 223 316 - -
Viun9g00592 560 SUPERFAMILY Protein kinase-like (PK-like) 225 523 IPR011009 -
Viun9g00592 560 MobiDBLite consensus disorder prediction 512 551 - -
Viun9g00592 560 CDD STKc_IRAK 247 513 - -
Viun9g00592 560 MobiDBLite consensus disorder prediction 160 194 - -
Viun9g00592 560 SMART serkin_6 241 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g00592 560 ProSitePatterns Protein kinases ATP-binding region signature. 247 270 IPR017441 GO:0005524
Viun9g00592 560 FunFam Putative receptor-like serine/threonine-protein kinase 317 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00592 Viun-Chr9 4346320 4350719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00592 76 515 Trihelix Transcription Factor Family AT1G70460 40.225 5.68e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Viun9g00592 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00592 - - vum:124826827 962.985